RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 DNASE1L2Q92874 299 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 IRF7Q92985 503 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 ZNF669Q96BR6 464 aaPredicted RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 VCPIP1Q96JH7 1222 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 NPY6RQ99463 290 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 EIF3CQ99613 913 aaKnown RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 DDX23Q9BUQ8 820 aaKnown RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 NRSN2Q9GZP1 204 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 RAB6CQ9H0N0 254 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 MFSD1Q9H3U5 465 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 CCDC86Q9H6F5 360 aaKnown RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 HPS4Q9NQG7 708 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 HEBP1Q9NRV9 189 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 GTSE1Q9NYZ3 720 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 CALCOCO1Q9P1Z2 691 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 TBC1D14Q9P2M4 693 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 GMPR2Q9P2T1 348 aaKnown RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 REV1Q9UBZ9 1251 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 XPO7Q9UIA9 1087 aaKnown RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 TMEM59LQ9UK28 342 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 AGO1Q9UL18 857 aaKnown RBP6.62□□□□□ -1.35
VPS4B-205ENST00000591383 PCDHA13Q9Y5I0 950 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 SNX10Q9Y5X0 201 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 MYOFQ9NZM1 2061 aa6.62□□□□□ -1.35
VPS4B-205ENST00000591383 TCRBV5S1A1TA0A578 114 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 TMEM191CA6NGB0 347 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 SLC22A31A6NKX4 558 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 F5H5T6 163 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ARHGAP6O43182 974 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 PRPSAP2O60256 369 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ACSL4O60488 711 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 RNF8O76064 485 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 KLKB1P03952 638 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 CYBBP04839 570 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 SLC2A3P11169 496 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 SNRPBP14678 240 aaKnown RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 NME1P15531 152 aaKnown RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 NOP2P46087 812 aaKnown RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 MASP1P48740 699 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ZNF143P52747 638 aaPredicted RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 NAP1L1P55209 391 aaKnown RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 HDAC4P56524 1084 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 CCZ1BP86790 482 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 CCZ1P86791 482 aaPredicted RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 RING1Q06587 406 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 C19orf57Q0VDD7 668 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 CCDC173Q0VFZ6 552 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 RUNX3Q13761 415 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 MLF2Q15773 248 aaPredicted RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 SMTNL2Q2TAL5 461 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 CCDC14Q49A88 953 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 BRMS1LQ5PSV4 323 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 LY6G5CQ5SRR4 150 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ZFYVE27Q5T4F4 411 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 PIK3R6Q5UE93 754 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 NADSYN1Q6IA69 706 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 RFWD3Q6PCD5 774 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 UNC5AQ6ZN44 842 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 Q6ZNB5 142 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 STRADAQ7RTN6 431 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 HDXQ7Z353 690 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 UNC45BQ8IWX7 931 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 UBALD2Q8IYN6 164 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 LGI2Q8N0V4 545 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 TXLNBQ8N3L3 684 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ZNF276Q8N554 614 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 CCDC185Q8N715 623 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ATP6V0D2Q8N8Y2 350 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 HJURPQ8NCD3 748 aaPredicted RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 NUDT8Q8WV74 236 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 BTN2A3PQ96KV6 586 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 PRICKLE1Q96MT3 831 aaPredicted RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 RPRD1AQ96P16 312 aaPredicted RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 DDX50Q9BQ39 737 aaKnown RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 BBS2Q9BXC9 721 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 TKTL2Q9H0I9 626 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 SIK2Q9H0K1 926 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 LINC00597Q9H2U6 94 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ZWILCHQ9H900 591 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 OSGEPQ9NPF4 335 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 KLHL11Q9NVR0 708 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 GPATCH2LQ9NWQ4 482 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 PLK2Q9NYY3 685 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 KLHL42Q9P2K6 505 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 UVRAGQ9P2Y5 699 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 PCSK1NQ9UHG2 260 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 SLC12A6Q9UHW9 1150 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 NDRG2Q9UN36 371 aaKnown RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ZNF510Q9Y2H8 683 aa6.61□□□□□ -1.35
VPS4B-205ENST00000591383 REXO2Q9Y3B8 237 aaKnown RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 EPN1Q9Y6I3 576 aaPredicted RBP6.61□□□□□ -1.35
VPS4B-205ENST00000591383 ZDBF2Q9HCK1 2354 aa6.6□□□□□ -1.35
VPS4B-205ENST00000591383 NYNRINQ9P2P1 1898 aaKnown RBP6.6□□□□□ -1.35
VPS4B-205ENST00000591383 F5P12259 2224 aa6.6□□□□□ -1.35
VPS4B-205ENST00000591383 GOLGA6L7A0A1B0GV03 622 aa6.6□□□□□ -1.35
VPS4B-205ENST00000591383 MACROD2A1Z1Q3 448 aa6.6□□□□□ -1.35
VPS4B-205ENST00000591383 FAM86C2PA6NEL3 165 aa6.6□□□□□ -1.35
VPS4B-205ENST00000591383 KCNU1A8MYU2 1149 aa6.6□□□□□ -1.35
VPS4B-205ENST00000591383 SPECC1L-ADORA2AF8WAN1 911 aa6.6□□□□□ -1.35
VPS4B-205ENST00000591383 LINC01387J3KSC0 135 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms