RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ARF5P84085 180 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 ACCSLQ4AC99 568 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 ATP13A4Q4VNC1 1196 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 PPP6R3Q5H9R7 873 aaPredicted RBP11.8□□□□□ -0.52
VMP1-211ENST00000591315 C6orf118Q5T5N4 469 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 ERMARDQ5T6L9 678 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 PMS2CLQ68D20 193 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 LAIR1Q6GTX8 287 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 Q6ZVU0 165 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 SETD3Q86TU7 594 aaPredicted RBP11.8□□□□□ -0.52
VMP1-211ENST00000591315 MMAAQ8IVH4 418 aaKnown RBP11.8□□□□□ -0.52
VMP1-211ENST00000591315 TP53INP2Q8IXH6 220 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 KIAA2013Q8IYS2 634 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 SH2D3CQ8N5H7 860 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 RTL3Q8N8U3 475 aaKnown RBP11.8□□□□□ -0.52
VMP1-211ENST00000591315 SPC24Q8NBT2 197 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 ARHGEF2Q92974 986 aaKnown RBP11.8□□□□□ -0.52
VMP1-211ENST00000591315 ZC3H10Q96K80 434 aaKnown RBP11.8□□□□□ -0.52
VMP1-211ENST00000591315 ACE2Q9BYF1 805 aaPredicted RBP11.8□□□□□ -0.52
VMP1-211ENST00000591315 TNKS2Q9H2K2 1166 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 ATP13A1Q9HD20 1204 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 ITM2CQ9NQX7 267 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 TMEM51Q9NW97 253 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 USP36Q9P275 1121 aaKnown RBP11.8□□□□□ -0.52
VMP1-211ENST00000591315 SERGEFQ9UGK8 458 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 SUN2Q9UH99 717 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 USP18Q9UMW8 372 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 CNOT1A5YKK6 2376 aaKnown RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 TNRC6BQ9UPQ9 1833 aaKnown RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 EDDM13A0A1B0GTR0 161 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 MID1O15344 667 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 ZBTB24O43167 697 aaPredicted RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 MAP3K13O43283 966 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 ATP9BO43861 1147 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 ZNF821O75541 412 aaPredicted RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 TMEM253P0C7T8 217 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 RARAP10276 462 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 GJC1P36383 396 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 PSMD8P48556 350 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 DHPSP49366 369 aaPredicted RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 OXCT1P55809 520 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 TPI1P60174 286 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 SLC25A11Q02978 314 aaKnown RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 SULT2A1Q06520 285 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 POM121L1PQ3SYA9 428 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 ACBD5Q5T8D3 534 aaPredicted RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 IL31Q6EBC2 164 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 TCEAL6Q6IPX3 200 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 SLC41A1Q8IVJ1 513 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 DCAF4L2Q8NA75 395 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 ATP11CQ8NB49 1132 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 CHST14Q8NCH0 376 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 HSPH1Q92598 858 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 PRCCQ92733 491 aaPredicted RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 TCEAL3Q969E4 200 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 HMCESQ96FZ2 354 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 TOE1Q96GM8 510 aaKnown RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 CELF6Q96J87 481 aaKnown RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 EPAS1Q99814 870 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 RSPH9Q9H1X1 276 aaPredicted RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 ETNK2Q9NVF9 386 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 KLHL11Q9NVR0 708 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 CWC15Q9P013 229 aaKnown RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 IP6K2Q9UHH9 426 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 SLC25A13Q9UJS0 675 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 SARDHQ9UL12 918 aa11.79□□□□□ -0.52
VMP1-211ENST00000591315 ATXN2Q99700 1313 aaKnown RBP11.79□□□□□ -0.52
VMP1-211ENST00000591315 DCHS1Q96JQ0 3298 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 SOWAHDA6NJG2 315 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 PATE3B3GLJ2 98 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 MYO1FO00160 1098 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 EEF2KO00418 725 aaKnown RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 RAMP2O60895 175 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 PROSCO94903 275 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 EPN2O95208 641 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 RETP07949 1114 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 CD48P09326 243 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 AMPD1P23109 780 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 MAOBP27338 520 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 ACSL1P33121 698 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 PCK1P35558 622 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 SSR1P43307 286 aaKnown RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 MAPKAPK2P49137 400 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 RPL6Q02878 288 aaKnown RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 CREB5Q02930 508 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 PIGHQ14442 188 aaPredicted RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 SF3A2Q15428 464 aaKnown RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 ELF2Q15723 593 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 AADATQ8N5Z0 425 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 NPWQ8N729 165 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 NIPA2Q8N8Q9 360 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 KDM1BQ8NB78 822 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 SLC35G2Q8TBE7 412 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 CTNNBL1Q8WYA6 563 aaPredicted RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 SPACA7Q96KW9 195 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 C2orf49Q9BVC5 232 aaPredicted RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 GPR174Q9BXC1 333 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 RXFP3Q9NSD7 469 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms