RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 LMLNQ96KR4 655 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 ACOX2Q99424 681 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 HEMGNQ9BXL5 484 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 SLC39A8Q9C0K1 460 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 CHRDQ9H2X0 955 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 ZNF212Q9UDV6 495 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 VPS51Q9UID3 782 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 RAD54BQ9Y620 910 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 STON1Q9Y6Q2 735 aa13.16□□□□□ -0.3
DDX39A-213ENST00000590315 CEP192Q8TEP8 1941 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 VCANP13611 3396 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 KCNK3O14649 394 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 DDX3YO15523 660 aaKnown RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 CST8O60676 142 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 NEBLO76041 1014 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 EPHX1P07099 455 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 SRPRAP08240 638 aaKnown RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 HLA-EP13747 358 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 ZFXP17010 805 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 NTSR1P30989 418 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 IL12RB1P42701 662 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 CDKN2BP42772 138 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 KIR2DL1P43626 348 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 RPS9P46781 194 aaKnown RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 PAPOLAP51003 745 aaKnown RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 PLK1P53350 603 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 GNG11P61952 73 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 STARD3Q14849 445 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 ARTNQ5T4W7 220 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 AADACL2Q6P093 401 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 NPNTQ6UXI9 565 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 KIAA0907Q7Z7F0 614 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 UMODL1-AS1Q8N2C9 162 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 IL17RCQ8NAC3 791 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 ALG3Q92685 438 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 TTC17Q96AE7 1141 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 HES6Q96HZ4 224 aa13.15□□□□□ -0.3
DDX39A-213ENST00000590315 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 THAP10Q9P2Z0 257 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-213ENST00000590315 TTC28Q96AY4 2481 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 hCG_1818297A0A087WSY0 165 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 A0A0A0MRY4 1105 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 C3orf70A6NLC5 250 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-213ENST00000590315 PRR33A8MZF0 331 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 WASH3PC4AMC7 463 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 SGK1O00141 431 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 ENC1O14682 589 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 NPC1O15118 1278 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 ZBTB24O43167 697 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-213ENST00000590315 LAMTOR5O43504 91 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 IL4RP24394 825 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 PRKCHP24723 683 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 GEMIN4P57678 1058 aaKnown RBP13.14□□□□□ -0.31
DDX39A-213ENST00000590315 COPS2P61201 443 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 MTAPQ13126 283 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 SERINC3Q13530 473 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 PAFAH1B3Q15102 231 aaKnown RBP13.14□□□□□ -0.31
DDX39A-213ENST00000590315 PPP2R5EQ16537 467 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 TP53INP2Q8IXH6 220 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 RYBPQ8N488 228 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-213ENST00000590315 PQLC3Q8N755 202 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 CCNYQ8ND76 341 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 NSMCE1Q8WV22 266 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 CLDN23Q96B33 292 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 FAF2Q96CS3 445 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 ALG14Q96F25 216 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 HHIPQ96QV1 700 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 NOL6Q9H6R4 1146 aaKnown RBP13.14□□□□□ -0.31
DDX39A-213ENST00000590315 LRRC19Q9H756 370 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 POLR3BQ9NW08 1133 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-213ENST00000590315 UBA2Q9UBT2 640 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-213ENST00000590315 MMP17Q9ULZ9 603 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 STARD13Q9Y3M8 1113 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 OR51B4Q9Y5P0 310 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 ACTL7AQ9Y615 435 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 TRIOO75962 3097 aa13.14□□□□□ -0.31
DDX39A-213ENST00000590315 ZSCAN5CA6NGD5 496 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-213ENST00000590315 TTC34A8MYJ7 566 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 ZNF487B1APH4 448 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 KDELR3O43731 214 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 GPR37L1O60883 481 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 PYGMP11217 842 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 HNRNPLP14866 589 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDX39A-213ENST00000590315 AVPR2P30518 371 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 RECQLP46063 649 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-213ENST00000590315 PEX5P50542 639 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 CCR3P51677 355 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 ARF5P84085 180 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 GBE1Q04446 702 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 FZD5Q13467 585 aa13.13□□□□□ -0.31
DDX39A-213ENST00000590315 PTPRNQ16849 979 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms