RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TMEM150BA6NC51 233 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 LRRC3CA6NJW4 275 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 ASAP2O43150 1006 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 EDIL3O43854 480 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 BRINP1O60477 761 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 USO1O60763 962 aaKnown RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 OPHN1O60890 802 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 BMP15O95972 392 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 AGR2O95994 175 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 SETSIPP0DME0 302 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 DARSP14868 501 aaKnown RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 MUTP22033 750 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 U2AF2P26368 475 aaKnown RBP eCLIP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 FLT3P36888 993 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 PIK3CAP42336 1068 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 ZNF131P52739 623 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 HTRA4P83105 476 aaPredicted RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 DUSP2Q05923 314 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 STRN3Q13033 797 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 GPM6BQ13491 265 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 MYBPC3Q14896 1274 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 ZRSR1Q15695 479 aaKnown RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 AAK1Q2M2I8 961 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 TCTN1Q2MV58 587 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 CNNM4Q6P4Q7 775 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 KANSL1Q7Z3B3 1105 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 FAM228AQ86W67 206 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 SPATS2Q86XZ4 545 aaKnown RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 ZBTB8OSQ8IWT0 167 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 FAM186BQ8IYM0 893 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 HACE1Q8IYU2 909 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 AHI1Q8N157 1196 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 LRRC43Q8N309 656 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 NAXEQ8NCW5 288 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 MCPH1Q8NEM0 835 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 OR10H5Q8NGA6 315 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 PPP1R14CQ8TAE6 165 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 PIGOQ8TEQ8 1089 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 GDPD5Q8WTR4 605 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 CCT6BQ92526 530 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 ZNF668Q96K58 619 aaPredicted RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 FDXACB1Q9BRP7 624 aaPredicted RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 C17orf80Q9BSJ5 609 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 AP1M1Q9BXS5 423 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 TEX101Q9BY14 249 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 MRPL9Q9BYD2 267 aaKnown RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 TRIM6Q9C030 488 aaPredicted RBP5.05□□□□□ -1.6
ZNF540-204ENST00000586792 CXorf56Q9H5V9 222 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 ERVK-5Q9HDB9 667 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 RGS18Q9NS28 235 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 ANKEF1Q9NU02 776 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 TMEM161AQ9NX61 479 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 THEGQ9P2T0 379 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 SLC17A6Q9P2U8 582 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 IP6K2Q9UHH9 426 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 PHTF1Q9UMS5 762 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 DNAH12Q6ZR08 3092 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 NLRC5Q86WI3 1866 aa5.05□□□□□ -1.6
ZNF540-204ENST00000586792 IGKV6-21A0A0C4DH24 114 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 VWA3AA6NCI4 1184 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 LRRIQ4A6NIV6 560 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 CGB1A6NKQ9 187 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 TBKBP1A7MCY6 615 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 J3KRW8 73 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 GPR39O43194 453 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 GPR32O75388 356 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 SLITRK3O94933 977 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 LYPLA2O95372 231 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 EYA4O95677 639 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 RB1P06400 928 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 XRCC6P12956 609 aaKnown RBP eCLIP5.04□□□□□ -1.6
ZNF540-204ENST00000586792 RPA1P27694 616 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 CA8P35219 290 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 PRPHP41219 470 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 ERVK-21P61565 698 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 LAMTOR4Q0VGL1 99 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 GBX1Q14549 363 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 PCBP1Q15365 356 aaKnown RBP eCLIP5.04□□□□□ -1.6
ZNF540-204ENST00000586792 SPDYE7PQ495Y7 208 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 EPC2Q52LR7 807 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 ARHGAP29Q52LW3 1261 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 LVRNQ6Q4G3 990 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 MAEAQ7L5Y9 396 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 SRGAP1Q7Z6B7 1085 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 CATSPER3Q86XQ3 398 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 PHYKPLQ8IUZ5 450 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 SYT12Q8IV01 421 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 THNSL1Q8IYQ7 743 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 LINC01465Q8N7H1 131 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 RNF149Q8NC42 400 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 URGCPQ8TCY9 931 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 LEO1Q8WVC0 666 aaPredicted RBP5.04□□□□□ -1.6
ZNF540-204ENST00000586792 PRPF31Q8WWY3 499 aaKnown RBP5.04□□□□□ -1.6
ZNF540-204ENST00000586792 TMEM143Q96AN5 459 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 CALML4Q96GE6 196 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 IFT74Q96LB3 600 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 MTMR9Q96QG7 549 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 SOX7Q9BT81 388 aa5.04□□□□□ -1.6
ZNF540-204ENST00000586792 POLR3CQ9BUI4 534 aaPredicted RBP5.04□□□□□ -1.6
ZNF540-204ENST00000586792 TARS2Q9BW92 718 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms