RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 MCF2LO15068 1137 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 TIMM44O43615 452 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 MAFKO60675 156 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 PRAMEF11O60813 436 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 ZMPSTE24O75844 475 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 URI1O94763 535 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 MAP3K6O95382 1288 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 DRD1P21728 446 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 PPIDQ08752 370 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 MBLAC2Q68D91 279 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 SLC35B2Q8TB61 432 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 FAM3CQ92520 227 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 CAPZA3Q96KX2 299 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 SPON2Q9BUD6 331 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 PDFQ9HBH1 243 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 FBRSL1Q9HCM7 1045 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 HOMER3Q9NSC5 361 aa17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 IPO11Q9UI26 975 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-203ENST00000586486 SHROOM3Q8TF72 1996 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 PRRT4C9JH25 899 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 ASLP04424 464 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 POLR2EP19388 210 aaKnown RBP17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 PAFAH1B1P43034 410 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 VASPP50552 380 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 IL10RBQ08334 325 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 PRKD1Q15139 912 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 PON2Q15165 354 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 CCNG2Q16589 344 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 DRICH1Q6PGQ1 229 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 ARHGAP36Q6ZRI8 547 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 ADAT2Q7Z6V5 191 aaKnown RBP17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 SHDQ96IW2 340 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 QKIQ96PU8 341 aaKnown RBP eCLIP17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 ELOVL2Q9NXB9 296 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 SMARCAL1Q9NZC9 954 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 FBXL21Q9UKT6 434 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 CA14Q9ULX7 337 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 STARD13Q9Y3M8 1113 aa17.33■□□□□ 0.37
PRKCSH-203ENST00000586486 VCANP13611 3396 aa17.33■□□□□ 0.36
PRKCSH-203ENST00000586486 KRBA1A5PL33 1030 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 TBC1D3BA6NDS4 549 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 CBX4O00257 560 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 SNAP91O60641 907 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF189O75820 626 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ATP5BP06576 529 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 GLDCP23378 1020 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 CCNCP24863 283 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 TNFRSF4P43489 277 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 GEMIN4P57678 1058 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 STARD6P59095 220 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 EIF3EP60228 445 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ARF5P84085 180 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ZXDAP98168 799 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 GRSF1Q12849 480 aaKnown RBP eCLIP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 CYP1B1Q16678 543 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 FSTL4Q6MZW2 842 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 TIGD7Q6NT04 549 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 RETSATQ6NUM9 610 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF852Q6ZMS4 543 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF354CQ86Y25 554 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 CCDC33Q8N5R6 958 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 PRELID2Q8N945 189 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 C12orf50Q8NA57 414 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 TFB1MQ8WVM0 346 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 EZH1Q92800 747 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 NKD2Q969F2 451 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF599Q96NL3 588 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 LGMNQ99538 433 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 SP110Q9HB58 689 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 HS3ST2Q9Y278 367 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 MRFAP1Q9Y605 127 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 GOLGA6L10A0A0M3HER8 536 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 PDE2AO00408 941 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 KRIT1O00522 736 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 LIASO43766 372 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 DLDP09622 509 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 RBP3P10745 1247 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ECT2LQ008S8 904 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 SLC20A2Q08357 652 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 E2F5Q15329 346 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 WHAMMP3Q1A5X7 153 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 SLC45A4Q5BKX6 768 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF572Q7Z3I7 529 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ZC3H18Q86VM9 953 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 CDKL3Q8IVW4 592 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 CCDC13Q8IYE1 715 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 KDM1BQ8NB78 822 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 UCMAQ8WVF2 138 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 C1orf54Q8WWF1 131 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 CASKIN2Q8WXE0 1202 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 ATG4AQ8WYN0 398 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 CIPCQ9C0C6 399 aa17.32■□□□□ 0.36
PRKCSH-203ENST00000586486 BCLAF3A2AJT9 711 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 J3KR12 359 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 K7EQS6 105 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 MTSS1O43312 755 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 PEX11BO96011 259 aa17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 SRPRAP08240 638 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 SERPINH1P50454 418 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-203ENST00000586486 CKAP4Q07065 602 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms