RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZNF33AQ06730 810 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PPIDQ08752 370 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 LMAN2Q12907 356 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SERINC3Q13530 473 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ASTLQ6HA08 431 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 TTC27Q6P3X3 843 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 DARS2Q6PI48 645 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 B4GALNT4Q76KP1 1039 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 KLHL7Q8IXQ5 586 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 NAT16Q8N8M0 369 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 OR7D4Q8NG98 312 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 LRRN4Q8WUT4 740 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 TFB1MQ8WVM0 346 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 HDAC11Q96DB2 347 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 LGMNQ99538 433 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 FEM1AQ9BSK4 669 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ACE2Q9BYF1 805 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 DDX47Q9H0S4 455 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 C10orf88Q9H8K7 445 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 BRD9Q9H8M2 597 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 USP29Q9HBJ7 922 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 GTSE1Q9NYZ3 720 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PCYOX1Q9UHG3 505 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 KDELR3O43731 214 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MAFKO60675 156 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ITGAVP06756 1048 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CCNCP24863 283 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 HLA-FP30511 346 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CD70P32970 193 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 GJA4P35212 333 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ETFBP38117 255 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CSKP41240 450 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SLC12A1Q13621 1099 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PRKD1Q15139 912 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ITPRIPL2Q3MIP1 535 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SLC45A4Q5BKX6 768 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CCDC137Q6PK04 289 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ARHGAP36Q6ZRI8 547 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 KIAA0907Q7Z7F0 614 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ETFBKMTQ8IXQ9 262 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MMGT1Q8N4V1 131 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CCNYQ8ND76 341 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RUNDC3BQ96NL0 473 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 QKIQ96PU8 341 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 KRT12Q99456 494 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SPON2Q9BUD6 331 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 IRF2BPLQ9H1B7 796 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 TRPV5Q9NQA5 729 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 FEZ2Q9UHY8 353 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 IPO11Q9UI26 975 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SORCS3Q9UPU3 1222 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ZNF148Q9UQR1 794 aa16.72■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RIOK3O14730 519 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SLU7O95391 586 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ASGR2P07307 311 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RBL1P28749 1068 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 STIP1P31948 543 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PTGIRP43119 386 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SLC6A11P48066 632 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 AP1B1Q10567 949 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 IL31Q6EBC2 164 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 C12orf40Q86WS4 652 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CDKL3Q8IVW4 592 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CCDC13Q8IYE1 715 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 UBALD2Q8IYN6 164 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 APCDD1Q8J025 514 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ATPAF2Q8N5M1 289 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 LRRN4CLQ8ND94 238 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 TTC8Q8TAM2 541 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 FATE1Q969F0 183 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 TMEM121Q9BTD3 319 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MUC3BQ9H195 1237 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 INTS6Q9UL03 887 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CHD5Q8TDI0 1954 aa16.71■□□□□ 0.27
CDK5RAP3-228ENST00000583363 J3KR12 359 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TRIM24O15164 1050 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GALR2O43603 387 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TULP3O75386 442 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ZMPSTE24O75844 475 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 VAV1P15498 845 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NUBP1P53384 320 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 LMNB2Q03252 620 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 IL10RBQ08334 325 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DMC1Q14565 340 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CCDC105Q8IYK2 499 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ALLCQ8N6M5 410 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TMEM105Q8N8V8 129 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NOA1Q8NC60 698 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CCDC26Q8TAB7 109 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CSGALNACT1Q8TDX6 532 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 HTR3CQ8WXA8 447 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SLCO2A1Q92959 643 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ATP13A1Q9HD20 1204 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ABCB8Q9NUT2 735 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DNAJC17Q9NVM6 304 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 AMACRQ9UHK6 382 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GGA2Q9UJY4 613 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SLC27A6Q9Y2P4 619 aa16.7■□□□□ 0.26
CDK5RAP3-228ENST00000583363 VPS13AQ96RL7 3174 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms