RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 RCOR3Q9P2K3 495 aaPredicted RBP6.79□□□□□ -1.32
NDEL1-216ENST00000583066 HESX1Q9UBX0 185 aa6.79□□□□□ -1.32
NDEL1-216ENST00000583066 SLC12A4Q9UP95 1085 aa6.79□□□□□ -1.32
NDEL1-216ENST00000583066 AKT3Q9Y243 479 aa6.79□□□□□ -1.32
NDEL1-216ENST00000583066 ARID2Q68CP9 1835 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 A0A087WZ62 844 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 IQANK1A0A1B0GTG1 560 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SPAARA0A1B0GVQ0 90 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SMIM35A0A1B0GVV1 85 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 BCLAF3A2AJT9 711 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 C2CD4BA6NLJ0 364 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 TCP11X1B4DZS4 312 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 GOLGA8SH3BPF8 625 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 J3QKU1 62 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 C2CD2LO14523 706 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PPP1R12AO14974 1030 aaPredicted RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CHUKO15111 745 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 MDM4O15151 490 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 NCAM2O15394 837 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 B4GALT5O43286 388 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 TSPAN1O60635 241 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CALCAP01258 141 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 RPLP2P05387 115 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 NFICP08651 508 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PDGFRAP16234 1089 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ARF4P18085 180 aaPredicted RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CYP3A5P20815 502 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PAX3P23760 479 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 MIPP30301 263 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 HNRNPH1P31943 449 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SLC8A1P32418 973 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 GJC1P36383 396 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PTPN9P43378 593 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 RAP1GAPP47736 663 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CXCL12P48061 93 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ALDH7A1P49419 539 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 RASSF2P50749 326 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 RNF144AP50876 292 aaPredicted RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SLC8A3P57103 927 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 EIF3EP60228 445 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CDK16Q00536 496 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 OTUD4Q01804 1114 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ROR1Q01973 937 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PDIA2Q13087 525 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CLN3Q13286 438 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SETDB1Q15047 1291 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 NOMO1Q15155 1222 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SEPT7Q16181 437 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PDK4Q16654 411 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ZNF394Q53GI3 561 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 C2CD6Q53TS8 623 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 FAM102AQ5T9C2 384 aaPredicted RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 NOTUMQ6P988 496 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SLC27A1Q6PCB7 646 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SCARA5Q6ZMJ2 495 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CYS1Q717R9 158 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 DPH6Q7L8W6 267 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PHLDB2Q86SQ0 1253 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ECHDC2Q86YB7 292 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 RFX6Q8HWS3 928 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CDKL3Q8IVW4 592 aaPredicted RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 TRIM42Q8IWZ5 723 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PALM2Q8IXS6 379 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 SRRM1Q8IYB3 904 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 HACE1Q8IYU2 909 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ZBED8Q8IZ13 594 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ABI1Q8IZP0 508 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 NME8Q8N427 588 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ZNF843Q8N446 348 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 MCUQ8NE86 351 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 CFAP61Q8NHU2 1237 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 DENND1AQ8TEH3 1009 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 HSFY1Q96LI6 401 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ZNF560Q96MR9 790 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 NELL2Q99435 816 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ELAC2Q9BQ52 826 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 FDXACB1Q9BRP7 624 aaPredicted RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ZNF670Q9BS34 389 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PITPNM3Q9BZ71 974 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 PLA2G2FQ9BZM2 168 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 ELOVL4Q9GZR5 314 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 VPS11Q9H270 941 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 TRABDQ9H4I3 376 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 VPS37BQ9H9H4 285 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 RXFP1Q9HBX9 757 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 LRRC4CQ9HCJ2 640 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 METTL5Q9NRN9 209 aaKnown RBP6.78□□□□□ -1.32
NDEL1-216ENST00000583066 KLC4Q9NSK0 619 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 POLIQ9UNA4 740 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 AGAP1Q9UPQ3 857 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 MYH10P35580 1976 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 MYH11P35749 1972 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 DOPEY2Q9Y3R5 2298 aa6.78□□□□□ -1.32
NDEL1-216ENST00000583066 LNP1A1A4G5 178 aa6.77□□□□□ -1.33
NDEL1-216ENST00000583066 HACD1B0YJ81 288 aa6.77□□□□□ -1.33
NDEL1-216ENST00000583066 TERTO14746 1132 aaKnown RBP6.77□□□□□ -1.33
NDEL1-216ENST00000583066 APOL1O14791 398 aa6.77□□□□□ -1.33
NDEL1-216ENST00000583066 TEX28O15482 410 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms