RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 IPO11Q9UI26 975 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 VPS51Q9UID3 782 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 FBXL21Q9UKT6 434 aa16.26■□□□□ 0.19
CSNK1D-212ENST00000580061 TBC1D3BA6NDS4 549 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 SNAP91O60641 907 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 MAFKO60675 156 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 ZMPSTE24O75844 475 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 POLR2EP19388 210 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 DRD1P21728 446 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 ZXDAP98168 799 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 XRCC4Q13426 336 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 EIF4HQ15056 248 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 PDK1Q15118 436 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 FSTL4Q6MZW2 842 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 NUDT18Q6ZVK8 323 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 EZH1Q92800 747 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 TSGA13Q96PP4 275 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 FAM118BQ9BPY3 351 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 PDFQ9HBH1 243 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 ELOVL2Q9NXB9 296 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 HPCAL4Q9UM19 191 aa16.25■□□□□ 0.19
CSNK1D-212ENST00000580061 MYO18AQ92614 2054 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 J3KR12 359 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 K7EQS6 105 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 CBX4O00257 560 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 PDE2AO00408 941 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 MCF2LO15068 1137 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 TIMM44O43615 452 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 PRAMEF11O60813 436 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 CD72P21854 359 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 CCNCP24863 283 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 PAFAH1B1P43034 410 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 CTSOP43234 321 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 TNFRSF4P43489 277 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 STARD6P59095 220 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 EIF3EP60228 445 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 SULT2A1Q06520 285 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 ZNF33AQ06730 810 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 IL10RBQ08334 325 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 PPIDQ08752 370 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 GRSF1Q12849 480 aaKnown RBP eCLIP16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 ZNF852Q6ZMS4 543 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 ZC3H18Q86VM9 953 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 PRELID2Q8N945 189 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 CCNYQ8ND76 341 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 SLC35B2Q8TB61 432 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 LRRN4Q8WUT4 740 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 C1orf54Q8WWF1 131 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 ATG4AQ8WYN0 398 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 SHDQ96IW2 340 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 LGMNQ99538 433 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 AP1M1Q9BXS5 423 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 FRMD8P1Q9BZ68 369 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 CIPCQ9C0C6 399 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 BRD8Q9H0E9 1235 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 SP110Q9HB58 689 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 STARD13Q9Y3M8 1113 aa16.24■□□□□ 0.19
CSNK1D-212ENST00000580061 ATG2BQ96BY7 2078 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 CXorf51AA0A1B0GTR3 108 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 ZSCAN5CA6NGD5 496 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 HACD1B0YJ81 288 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 LIASO43766 372 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 PEX11BO96011 259 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 EGFP01133 1207 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 ASLP04424 464 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 ATP5BP06576 529 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 RBP3P10745 1247 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 ECT2LQ008S8 904 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 TUBB2AQ13885 445 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 PRKD1Q15139 912 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 CCNG2Q16589 344 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 SLC45A4Q5BKX6 768 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 TIGD7Q6NT04 549 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 RETSATQ6NUM9 610 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 B4GALNT4Q76KP1 1039 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 CCDC13Q8IYE1 715 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 SIX5Q8N196 739 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 TFB1MQ8WVM0 346 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 SORCS1Q8WY21 1168 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 QKIQ96PU8 341 aaKnown RBP eCLIP16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 TUBB2BQ9BVA1 445 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 HOMER3Q9NSC5 361 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 MRFAP1Q9Y605 127 aa16.23■□□□□ 0.19
CSNK1D-212ENST00000580061 ANTXRLA6NF34 631 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 H7C0C1 242 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 KRIT1O00522 736 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 MATN3O15232 486 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 CD160O95971 181 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 SRPRAP08240 638 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 DLDP09622 509 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 VAV1P15498 845 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 ATP5OP48047 213 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 SLC20A2Q08357 652 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 AP1B1Q10567 949 aa16.22■□□□□ 0.19
CSNK1D-212ENST00000580061 CCINQ13939 588 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms