RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 EML3Q32P44 896 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 KLHDC10Q6PID8 442 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 FAM183BPQ6ZVS7 135 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 FAM126BQ8IXS8 530 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 DEFB106AQ8N104 65 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 RDH11Q8TC12 318 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 TRIM63Q969Q1 353 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 SLC7A6OSQ96CW6 309 aaPredicted RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 FAM120BQ96EK7 910 aaKnown RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 TEX12Q9BXU0 123 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 UBIAD1Q9Y5Z9 338 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 AFDNP55196 1824 aaKnown RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 C2P06681 752 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 HSMCR30P0CW71 290 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 IDH3AP50213 366 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 TNK2Q07912 1038 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 GRM1Q13255 1194 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 MOGSQ13724 837 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 SPIDRQ14159 915 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 PTRHD1Q6GMV3 140 aaKnown RBP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 SLC41A1Q8IVJ1 513 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 SYTL1Q8IYJ3 562 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 ROGDIQ9GZN7 287 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 CXorf21Q9HAI6 301 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 RBM22Q9NW64 420 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 POLG2Q9UHN1 485 aa13.32□□□□□ -0.28
PCDHGB3-201ENST00000576222 CNOT3O75175 753 aaKnown RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 TMEM63AO94886 807 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 SEC24AO95486 1093 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 PGK2P07205 417 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 C15orf52Q6ZUT6 534 aaKnown RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF276Q8N554 614 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 LPGAT1Q92604 370 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 PRKD2Q9BZL6 878 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ASB7Q9H672 318 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 XPR1Q9UBH6 696 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 EGFL7Q9UHF1 273 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 PNMA8CA0A1B0GUJ8 204 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 PDZK1P1A8MUH7 402 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ASLP04424 464 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 LBPP18428 481 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 PCSK1P29120 753 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 GDF10P55107 478 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 TGFB2P61812 414 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 LSM3P62310 102 aaKnown RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 CDC42EP1Q00587 391 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 SPANXN2Q5MJ10 180 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ANKS6Q68DC2 871 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 TIGD7Q6NT04 549 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 TMEM26Q6ZUK4 368 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 AHI1Q8N157 1196 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 APOL5Q9BWW9 433 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 LACTBL1A8MY62 500 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 VWA5AO00534 786 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ACKR2O00590 384 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 LYPLA2O95372 231 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 HIST1H2AGP0C0S8 130 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 HIST1H2ADP20671 130 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 KLRC2P26717 231 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 SLC5A3P53794 718 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 BNIP2Q12982 314 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 PPM1JQ5JR12 505 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 FNDC5Q8NAU1 212 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 BPIFB6Q8NFQ5 453 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 DNAJB14Q8TBM8 379 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ACTRT2Q8TDY3 377 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 S100ZQ8WXG8 99 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 CPB2Q96IY4 423 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 HIST1H2AHQ96KK5 128 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 LGMNQ99538 433 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 HIST1H2AJQ99878 128 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 H2AFJQ9BTM1 129 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 PRDM12Q9H4Q4 367 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 GPBP1L1Q9HC44 474 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ABCB10Q9NRK6 738 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 COL5A2P05997 1499 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 A0A087X1B8 175 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 SYNCRIPO60506 623 aaKnown RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 HNRNPLP14866 589 aaKnown RBP eCLIP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 GNAZP19086 355 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 TOP3AQ13472 1001 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 UGCGQ16739 394 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZRANB3Q5FWF4 1079 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 SPOUT1Q5T280 376 aaKnown RBP13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 GK5Q6ZS86 529 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 IL31RAQ8NI17 732 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 DCAKDQ8WVC6 231 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 HPS1Q92902 700 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 SLC10A4Q96EP9 437 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 COQ7Q99807 217 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZBED2Q9BTP6 218 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 TMEM134Q9H6X4 195 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 CAB39LQ9H9S4 337 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 VPS9D1Q9Y2B5 631 aa13.31□□□□□ -0.28
PCDHGB3-201ENST00000576222 ATP6AP2A0A1C7CYW4 349 aa13.3□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF197O14709 1029 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms