RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ACADMP11310 421 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 HLA-EP13747 358 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 ERCC2P18074 760 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 PRKCHP24723 683 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 CTSOP43234 321 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 SFSWAPQ12872 951 aaKnown RBP13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 CAMK2GQ13555 558 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 C11orf63Q6NUN7 778 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 TMCO3Q6UWJ1 677 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 SH2D3CQ8N5H7 860 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 ATP11CQ8NB49 1132 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 OR2T3Q8NH03 318 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 PRCCQ92733 491 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 MRGPRX3Q96LB0 322 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZNF670Q9BS34 389 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 CALN1Q9BXU9 219 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 PRDM16Q9HAZ2 1276 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 PCDH18Q9HCL0 1135 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 NDFIP2Q9NV92 336 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 POLR3BQ9NW08 1133 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 VPS51Q9UID3 782 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 HS3ST2Q9Y278 367 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 ALG6Q9Y672 507 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 EML5Q05BV3 1969 aa13.06□□□□□ -0.32
TRAPPC1-206ENST00000573989 SPAG17Q6Q759 2223 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 RASA4BC9J798 803 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 RASA4O43374 803 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 PSTPIP1O43586 416 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 BUB1O43683 1085 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 KDELR3O43731 214 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 ATP9BO43861 1147 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 BUB1BO60566 1050 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 SNAP91O60641 907 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 CCDC175P0C221 793 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 COMTP21964 271 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 NBL1P41271 181 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 RECQLP46063 649 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 NUMBP49757 651 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 STK19P49842 368 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 TAS2R40P59535 323 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 DPYSQ14117 519 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 DLG2Q15700 870 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 TXNRD3NBQ6F5E7 133 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 KIAA1211LQ6NV74 962 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 CEP68Q76N32 757 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 DSG4Q86SJ6 1040 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 VSIG1Q86XK7 387 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 TMPRSS6Q8IU80 811 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 SYCE1Q8N0S2 351 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZNF366Q8N895 744 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 MDGA1Q8NFP4 955 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 TPCN2Q8NHX9 752 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 CASKIN2Q8WXE0 1202 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 SIPA1Q96FS4 1042 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 MYO19Q96H55 970 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 CSPG4P5Q96PW8 444 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 PSMB7Q99436 277 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 DESI2Q9BSY9 194 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 MAK16Q9BXY0 300 aaKnown RBP13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 CEP44Q9C0F1 390 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 PRSS16Q9NQE7 514 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 SLCO3A1Q9UIG8 710 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 RAB23Q9ULC3 237 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 SCML1Q9UN30 329 aa13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 REXO2Q9Y3B8 237 aaKnown RBP13.05□□□□□ -0.32
TRAPPC1-206ENST00000573989 WDFY4Q6ZS81 3184 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 PLXND1Q9Y4D7 1925 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 LRRD1A4D1F6 860 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 RCCD1A6NED2 376 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZNF487B1APH4 448 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 LILRB5O75023 590 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 SIN3BO75182 1162 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 RPP40O75818 363 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 SRCP12931 536 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 TNNT1P13805 278 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 GABRG2P18507 467 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 NDUFV2P19404 249 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 AMPD1P23109 780 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 KDELR1P24390 212 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 ACVRL1P37023 503 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 SERPINH1P50454 418 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 NHLH1Q02575 133 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 DPYSL3Q14195 570 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 ELAVL3Q14576 367 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 TTC31Q49AM3 519 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZNF776Q68DI1 518 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 KIAA1324Q6UXG2 1013 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 RNF10Q8N5U6 811 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 KIAA1524Q8TCG1 905 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 OR8D1Q8WZ84 308 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 MRGPRX1Q96LB2 322 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 TPSD1Q9BZJ3 242 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms