RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 MYL1P05976 194 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 FYNP06241 537 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 GIMD1P0DJR0 217 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 VDRP11473 427 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 KRT13P13646 458 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 C5AR1P21730 350 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 DRD3P35462 400 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 ARRB1P49407 418 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 ADPRHP54922 357 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 ADIGQ0VDE8 80 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 BST2Q10589 180 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 OVGP1Q12889 678 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 CBLBQ13191 982 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 ZCWPW2Q504Y3 356 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 SGO2Q562F6 1265 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 PITRM1Q5JRX3 1037 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 CDCP2Q5VXM1 449 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 NAPEPLDQ6IQ20 393 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 MMS22LQ6ZRQ5 1243 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 MFN1Q8IWA4 741 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 GUF1Q8N442 669 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 OR14C36Q8NHC7 312 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 UBA3Q8TBC4 463 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 GANCQ8TET4 914 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 IRGQQ8WZA9 623 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 EEF2KMTQ96G04 330 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 SERAC1Q96JX3 654 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 PRICKLE1Q96MT3 831 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 ZNF578Q96N58 590 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 OMDQ99983 421 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 CYTH4Q9UIA0 394 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 KIAA1257Q9ULG3 409 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 HPSEQ9Y251 543 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 PTPRQQ9UMZ3 2332 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 KALRNO60229 2985 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 ZNF462Q96JM2 2506 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3DA0A087WVF3 549 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3IA0A087WXS9 549 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3EA0A087X179 549 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3KA0A087X1G2 549 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 EDDM13A0A1B0GTR0 161 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3FA6NER0 549 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3LB9A6J9 549 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 O00370 1275 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 SIGLEC6O43699 453 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 MAGEC1O60732 1142 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3HP0C7X1 549 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 CDK11BP21127 795 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 RPL13P26373 211 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 NUDT1P36639 197 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 ME1P48163 572 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 RPL34P49207 117 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 SLC11A2P49281 568 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBX4P57082 545 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 PPP2CBP62714 309 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 RPS24P62847 133 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 PPP2CAP67775 309 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 CXADRP78310 365 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 ECT2LQ008S8 904 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 RHDQ02161 417 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 CCDC173Q0VFZ6 552 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 NNTQ13423 1086 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 CNGA2Q16280 664 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 GOLGA7BQ2TAP0 167 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 DCAF6Q58WW2 860 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 SLC45A4Q5BKX6 768 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 MS4A13Q5J8X5 152 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 NUGGCQ68CJ6 796 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 ATL3Q6DD88 541 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3GQ6DHY5 549 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3CQ6IPX1 549 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 PMF1Q6P1K2 205 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 LCLAT1Q6UWP7 414 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 PRPF39Q86UA1 669 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D3Q8IZP1 549 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 APCDD1Q8J025 514 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 STK40Q8N2I9 435 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 ZNF248Q8NDW4 579 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 FRS2Q8WU20 508 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 FCRL2Q96LA5 508 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 IPO9Q96P70 1041 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 MMRN2Q9H8L6 949 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 HESX1Q9UBX0 185 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 USP25Q9UHP3 1055 aa8.37□□□□□ -1.07
NPLOC4-211ENST00000573212 SHROOM3Q8TF72 1996 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 FAM237AA0A1B0GTK4 181 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 A0A1B0GVL5 298 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 B8ZZF3 427 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 PLRG1O43660 514 aaKnown RBP8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 RNGTTO60942 597 aaKnown RBP8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 CPNE3O75131 537 aaKnown RBP8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 LUC7L3O95232 432 aaKnown RBP8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 SETSIPP0DME0 302 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 LCP1P13796 627 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 CMA1P23946 247 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 LSSP48449 732 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 PLK1P53350 603 aa8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 EIF4EBP2Q13542 120 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-211ENST00000573212 CUL2Q13617 745 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms