RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ATXN2Q99700 1313 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 LNP1A1A4G5 178 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 TMCO5BA8MYB1 307 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 GOLGA6L19H0YKK7 550 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 K7ERQ8 282 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 SMAD6O43541 496 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 GDF9O60383 454 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 RTN2O75298 545 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 FTLP02792 175 aaPredicted RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 SERPING1P05155 500 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 CYP1A2P05177 515 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 EPHX1P07099 455 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 CTSLP07711 333 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 SRPRAP08240 638 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 SRCP12931 536 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 ECT2LQ008S8 904 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 SLC25A11Q02978 314 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 SF3A2Q15428 464 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 CSRP2Q16527 193 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 FNDC3BQ53EP0 1204 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 SPECC1LQ69YQ0 1117 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 PRR23CQ6ZRP0 262 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 TMC6Q7Z403 805 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 SETD3Q86TU7 594 aaPredicted RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 TMPRSS6Q8IU80 811 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 KIAA2013Q8IYS2 634 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 SH2D3CQ8N5H7 860 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 AADATQ8N5Z0 425 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 OR7D4Q8NG98 312 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 ZNF653Q96CK0 615 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 RMDN1Q96DB5 314 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 IQCDQ96DY2 449 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 RPL10LQ96L21 214 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 SNRNP25Q9BV90 132 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 SELENOOQ9BVL4 669 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 ACE2Q9BYF1 805 aaPredicted RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 THAP2Q9H0W7 228 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 ARRDC1-AS1Q9H2J1 176 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 ITM2CQ9NQX7 267 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 ABHD10Q9NUJ1 306 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 SEPT11Q9NVA2 429 aaKnown RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 TMEM248Q9NWD8 314 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 GPATCH2LQ9NWQ4 482 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 KIAA1522Q9P206 1035 aaPredicted RBP8.91□□□□□ -0.98
SMG6-210ENST00000572205 ADAMTS1Q9UHI8 967 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 PILRBQ9UKJ0 227 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 SARDHQ9UL12 918 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 CYP8B1Q9UNU6 501 aa8.91□□□□□ -0.98
SMG6-210ENST00000572205 COL5A1P20908 1838 aaPredicted RBP8.9□□□□□ -0.98
SMG6-210ENST00000572205 KNL1Q8NG31 2342 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 WASH4PA8MWX3 477 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 H0Y626 953 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 TM4SF5O14894 197 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 SPINT1O43278 529 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 ALDH1A2O94788 518 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 IGHV4-34P06331 123 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 ZNF806P0C7X5 589 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 POLR2EP19388 210 aaKnown RBP8.9□□□□□ -0.98
SMG6-210ENST00000572205 TNFAIP3P21580 790 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 ITPKAP23677 461 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 L1CAMP32004 1257 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 ACSL1P33121 698 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 ACVRL1P37023 503 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 BNC1Q01954 994 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 USP39Q53GS9 565 aaKnown RBP8.9□□□□□ -0.98
SMG6-210ENST00000572205 SPDYCQ5MJ68 293 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 RNF219Q5W0B1 726 aaPredicted RBP8.9□□□□□ -0.98
SMG6-210ENST00000572205 AFMIDQ63HM1 303 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 CEP68Q76N32 757 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 ARHGAP12Q8IWW6 846 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 TMEFF1Q8IYR6 380 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 NPWQ8N729 165 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 NIPA2Q8N8Q9 360 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 TC2NQ8N9U0 490 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 UCMAQ8WVF2 138 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 ZNF419Q96HQ0 510 aaPredicted RBP8.9□□□□□ -0.98
SMG6-210ENST00000572205 BTBD6Q96KE9 485 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 KCTD15Q96SI1 283 aaPredicted RBP8.9□□□□□ -0.98
SMG6-210ENST00000572205 CHP1Q99653 195 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 ZYG11BQ9C0D3 744 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 LRRC19Q9H756 370 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 PRDM16Q9HAZ2 1276 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 PDFQ9HBH1 243 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 CAPN10Q9HC96 672 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 TMEM51Q9NW97 253 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 NCDNQ9UBB6 729 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 CNOT8Q9UFF9 292 aaKnown RBP8.9□□□□□ -0.98
SMG6-210ENST00000572205 OR12D3Q9UGF7 316 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 RABGEF1Q9UJ41 708 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 MFHAS1Q9Y4C4 1052 aa8.9□□□□□ -0.98
SMG6-210ENST00000572205 KMT2BQ9UMN6 2715 aaPredicted RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 SSU72P8A0A1W2PR75 194 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 ILVBLA1L0T0 632 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 TYW5A2RUC4 315 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 ATP5BP06576 529 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 RHOCP08134 193 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 CCDC172P0C7W6 258 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 HOXB1P14653 301 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms