RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SSR1P43307 286 aaKnown RBP13.72□□□□□ -0.21
CCDC40-205ENST00000571028 PTPN9P43378 593 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 ZNF143P52747 638 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-205ENST00000571028 NNTQ13423 1086 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 SUZ12Q15022 739 aaKnown RBP13.72□□□□□ -0.21
CCDC40-205ENST00000571028 EGFLAMQ63HQ2 1017 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 NADSYN1Q6IA69 706 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 LRRC69Q6ZNQ3 347 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 ARCQ7LC44 396 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 LGI2Q8N0V4 545 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 ACRBPQ8NEB7 543 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 NT5C3BQ969T7 300 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 BTN2A3PQ96KV6 586 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 DESI2Q9BSY9 194 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 DNAJC17Q9NVM6 304 aaKnown RBP13.72□□□□□ -0.21
CCDC40-205ENST00000571028 PCSK1NQ9UHG2 260 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 ANAPC7Q9UJX3 599 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 HELZP42694 1942 aaKnown RBP13.71□□□□□ -0.21
CCDC40-205ENST00000571028 PLXND1Q9Y4D7 1925 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 FAM149AA5PLN7 773 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 KCNU1A8MYU2 1149 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 ATXN7O15265 892 aaPredicted RBP13.71□□□□□ -0.21
CCDC40-205ENST00000571028 PAGE1O75459 146 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 RNF8O76064 485 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 HLA-EP13747 358 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 PLA2G2AP14555 144 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 TACR2P21452 398 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 FECHP22830 423 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 CHKAP35790 457 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 NOP2P46087 812 aaKnown RBP13.71□□□□□ -0.21
CCDC40-205ENST00000571028 CXCR3P49682 368 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 STARD3Q14849 445 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 ADGRF1Q5T601 910 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 TMEM139Q8IV31 216 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 CFAP52Q8N1V2 620 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 ZNF564Q8TBZ8 553 aaPredicted RBP13.71□□□□□ -0.21
CCDC40-205ENST00000571028 TMA16Q96EY4 203 aaKnown RBP13.71□□□□□ -0.21
CCDC40-205ENST00000571028 PGAP3Q96FM1 320 aaPredicted RBP13.71□□□□□ -0.21
CCDC40-205ENST00000571028 MRGPRX1Q96LB2 322 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 XPO6Q96QU8 1125 aaKnown RBP13.71□□□□□ -0.21
CCDC40-205ENST00000571028 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
CCDC40-205ENST00000571028 CNPY3Q9BT09 278 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 IL21RQ9HBE5 538 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 OSGEPQ9NPF4 335 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 ANLNQ9NQW6 1124 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 STARD13Q9Y3M8 1113 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
CCDC40-205ENST00000571028 APC2O95996 2303 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
CCDC40-205ENST00000571028 F5H5T6 163 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 BCAT2O15382 392 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-205ENST00000571028 TBL1XO60907 577 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 TYRP14679 529 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 SGSHP51688 502 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 HDAC4P56524 1084 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 EIF4EBP2Q13542 120 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-205ENST00000571028 MESDQ14696 234 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 HLA-BQ31612 363 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 ARL13BQ3SXY8 428 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
CCDC40-205ENST00000571028 MS4A13Q5J8X5 152 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 BRMS1LQ5PSV4 323 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 PIK3R6Q5UE93 754 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 STRADAQ7RTN6 431 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 KIAA1328Q86T90 577 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 CCDC185Q8N715 623 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 SLC35G2Q8TBE7 412 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 MYEOVQ96EZ4 313 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 TOE1Q96GM8 510 aaKnown RBP13.7□□□□□ -0.22
CCDC40-205ENST00000571028 ACOX2Q99424 681 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
CCDC40-205ENST00000571028 GPR174Q9BXC1 333 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 MAGEB5Q9BZ81 275 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 SLC6A17Q9H1V8 727 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 CD93Q9NPY3 652 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 LUC7LQ9NQ29 371 aaKnown RBP13.7□□□□□ -0.22
CCDC40-205ENST00000571028 ARHGEF38Q9NXL2 777 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 FNDC3AQ9Y2H6 1198 aaKnown RBP13.7□□□□□ -0.22
CCDC40-205ENST00000571028 PAXBP1Q9Y5B6 917 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 HS3ST4Q9Y661 456 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 ACACAQ13085 2346 aa13.7□□□□□ -0.22
CCDC40-205ENST00000571028 PI4KAP42356 2102 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 E9PAM4 449 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 MYO1FO00160 1098 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 TRIM24O15164 1050 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 RRP8O43159 456 aaKnown RBP13.69□□□□□ -0.22
CCDC40-205ENST00000571028 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 C1QL1O75973 258 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 ENDOD1O94919 500 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 LATS1O95835 1130 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 GJC1P36383 396 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 NAP1L1P55209 391 aaKnown RBP13.69□□□□□ -0.22
CCDC40-205ENST00000571028 RPS24P62847 133 aaKnown RBP13.69□□□□□ -0.22
CCDC40-205ENST00000571028 MPPE1Q53F39 396 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 C14orf80Q86SX3 495 aa13.69□□□□□ -0.22
CCDC40-205ENST00000571028 CIR1Q86X95 450 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-205ENST00000571028 CPNE8Q86YQ8 564 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms