RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 DNTTP04053 509 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 SYPP08247 313 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 TMEM253P0C7T8 217 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 MYBL1P10243 752 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 GNSP15586 552 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 PDGFRAP16234 1089 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 MZF1P28698 734 aaPredicted RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 STK19P49842 368 aaPredicted RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 ATXN3P54252 364 aaPredicted RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 BNC1Q01954 994 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 AUHQ13825 339 aaKnown RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 TTC31Q49AM3 519 aaPredicted RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 C5orf22Q49AR2 442 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 RABGAP1LQ5R372 815 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 C9orf64Q5T6V5 341 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 TRNP1Q6NT89 227 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 PHLDB2Q86SQ0 1253 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 TXLNBQ8N3L3 684 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 OR52K2Q8NGK3 314 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 RNF34Q969K3 372 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 PGAP3Q96FM1 320 aaPredicted RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 THAP2Q9H0W7 228 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 PABPC3Q9H361 631 aaKnown RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 ARHGEF38Q9NXL2 777 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 SERGEFQ9UGK8 458 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 SLC12A6Q9UHW9 1150 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 EIF2B4Q9UI10 523 aaKnown RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 SLCO3A1Q9UIG8 710 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 VANGL2Q9ULK5 521 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 TFR2Q9UP52 801 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 WASF3Q9UPY6 502 aa15.54■□□□□ 0.08
RAB40B-203ENST00000570676 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.54■□□□□ 0.08
RAB40B-203ENST00000570676 PCNX2A6NKB5 2137 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 EDDM13A0A1B0GTR0 161 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 RCCD1A6NED2 376 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 C10orf142B7Z368 130 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 ZSCAN12O43309 604 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 ATMINO43313 823 aaPredicted RBP15.53■□□□□ 0.08
RAB40B-203ENST00000570676 PAGE1O75459 146 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 SEMA4FO95754 770 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 CD59P13987 128 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 RRM1P23921 792 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 FLT3P36888 993 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 CXCR3P49682 368 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 NUMBP49757 651 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 SULT1E1P49888 294 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 PLK1P53350 603 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 ECT2LQ008S8 904 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 MTA1Q13330 715 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 SLC12A1Q13621 1099 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 FAM102AQ5T9C2 384 aaPredicted RBP15.53■□□□□ 0.08
RAB40B-203ENST00000570676 USP30Q70CQ3 517 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 C14orf80Q86SX3 495 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 HDDC3Q8N4P3 179 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 PTPRN2Q92932 1015 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 ARHGEF26Q96DR7 871 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 ALG14Q96F25 216 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 RPL10LQ96L21 214 aaKnown RBP15.53■□□□□ 0.08
RAB40B-203ENST00000570676 RPRD1AQ96P16 312 aaPredicted RBP15.53■□□□□ 0.08
RAB40B-203ENST00000570676 BTBD1Q9H0C5 482 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 MIR1-1HGQ9H1L0 117 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 RRN3Q9NYV6 651 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.53■□□□□ 0.08
RAB40B-203ENST00000570676 MYO1AQ9UBC5 1043 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 CNOT8Q9UFF9 292 aaKnown RBP15.53■□□□□ 0.08
RAB40B-203ENST00000570676 STAP1Q9ULZ2 295 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 ZKSCAN5Q9Y2L8 839 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 ACACBO00763 2458 aa15.53■□□□□ 0.08
RAB40B-203ENST00000570676 TPRP12270 2363 aaKnown RBP15.53■□□□□ 0.08
RAB40B-203ENST00000570676 A0A0U1RQJ8 604 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 TARSL2A2RTX5 802 aaKnown RBP15.52■□□□□ 0.08
RAB40B-203ENST00000570676 GOLGA8SH3BPF8 625 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 BCAT2O15382 392 aaPredicted RBP15.52■□□□□ 0.08
RAB40B-203ENST00000570676 CYP1A2P05177 515 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 KIF5AQ12840 1032 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 CST6Q15828 149 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 BRMS1LQ5PSV4 323 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 DNAJC24Q6P3W2 148 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 BNIPLQ7Z465 357 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 ZNF683Q8IZ20 524 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 FAM129BQ96TA1 746 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 TBCBQ99426 244 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 ORAI3Q9BRQ5 295 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 LACRTQ9GZZ8 138 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 SGK2Q9HBY8 427 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 TRMT1Q9NXH9 659 aaKnown RBP15.52■□□□□ 0.08
RAB40B-203ENST00000570676 TMEM59LQ9UK28 342 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 SCML1Q9UN30 329 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 OR51B4Q9Y5P0 310 aa15.52■□□□□ 0.08
RAB40B-203ENST00000570676 CHD5Q8TDI0 1954 aa15.52■□□□□ 0.07
RAB40B-203ENST00000570676 MAP1BP46821 2468 aaKnown RBP15.52■□□□□ 0.07
RAB40B-203ENST00000570676 MID1O15344 667 aa15.51■□□□□ 0.07
RAB40B-203ENST00000570676 PJA2O43164 708 aa15.51■□□□□ 0.07
RAB40B-203ENST00000570676 IGHV4-34P06331 123 aa15.51■□□□□ 0.07
RAB40B-203ENST00000570676 VAV1P15498 845 aa15.51■□□□□ 0.07
RAB40B-203ENST00000570676 RNASE9P60153 205 aaKnown RBP15.51■□□□□ 0.07
RAB40B-203ENST00000570676 SLC25A52Q3SY17 297 aa15.51■□□□□ 0.07
RAB40B-203ENST00000570676 ARTNQ5T4W7 220 aa15.51■□□□□ 0.07
RAB40B-203ENST00000570676 RNF219Q5W0B1 726 aaPredicted RBP15.51■□□□□ 0.07
RAB40B-203ENST00000570676 MMAAQ8IVH4 418 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms