RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 NR0B2Q15466 257 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 DEFB133Q30KQ1 61 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 DCAF6Q58WW2 860 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 MS4A13Q5J8X5 152 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 PIP5KL1Q5T9C9 394 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 OR6B2Q6IFH4 312 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 Q6ZSR6 202 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 B3GNT8Q7Z7M8 397 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 DSG4Q86SJ6 1040 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 VASH2Q86V25 355 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 HORMAD1Q86X24 394 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 JAMLQ86YT9 394 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 SLC9A9Q8IVB4 645 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 CCDC117Q8IWD4 279 aaPredicted RBP10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 FBXO39Q8N4B4 442 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 FAM26EQ8N5C1 309 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 TMEM174Q8WUU8 243 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 OR8D1Q8WZ84 308 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 IPO9Q96P70 1041 aaKnown RBP10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 IMPG2Q9BZV3 1241 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 DNAI2Q9GZS0 605 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 LRRC4Q9HBW1 653 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 GPR27Q9NS67 375 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 NCKIPSDQ9NZQ3 722 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 ANKRD17O75179 2603 aaKnown RBP10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 POM121BA6NF01 834 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 C1QTNF3-AMACRE9PGA6 284 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 AQP9O43315 295 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 GABBR2O75899 941 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 CSF2P04141 144 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 HGFP14210 728 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 NME1P15531 152 aaKnown RBP10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 GCLMP48507 274 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 DAOAP59103 153 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 C1QBPQ07021 282 aaKnown RBP10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 SPIDRQ14159 915 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 GOLGA7BQ2TAP0 167 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 MANEAQ5SRI9 462 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 NEK5Q6P3R8 708 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 RAB11FIP2Q7L804 512 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 DCP2Q8IU60 420 aaKnown RBP10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 WDR48Q8TAF3 677 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 GOLGA5Q8TBA6 731 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 DHX58Q96C10 678 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 FCRL2Q96LA5 508 aaPredicted RBP10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 DDX50Q9BQ39 737 aaKnown RBP10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 BOCQ9BWV1 1114 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 BLZF1Q9H2G9 400 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 CISHQ9NSE2 258 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 ZFR2Q9UPR6 939 aaKnown RBP10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 SDK2Q58EX2 2172 aa10.74□□□□□ -0.69
CTDNEP1-202ENST00000570380 SPTY2D1-AS1A0A0U1RR47 76 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 VPS37CA5D8V6 355 aaPredicted RBP10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 A6NNZ2 444 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 NTN3O00634 580 aaPredicted RBP10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 TPP1O14773 563 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 MCF2LO15068 1137 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 CD2BP2O95400 341 aaKnown RBP10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 CASRP41180 1078 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 PPP3CAQ08209 521 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 EIF3IQ13347 325 aaKnown RBP10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 MORC3Q14149 939 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 SLC39A14Q15043 492 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 ACCSLQ4AC99 568 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 PTAR1Q7Z6K3 402 aaPredicted RBP10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 SLC35F3Q8IY50 421 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 LGI2Q8N0V4 545 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 SIX6OS1Q8N1H7 587 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 SCML4Q8N228 414 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 ZSCAN1Q8NBB4 408 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 UBA3Q8TBC4 463 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 FAM174AQ8TBP5 190 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 LMX1AQ8TE12 382 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 KCTD13Q8WZ19 329 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 IL12RB2Q99665 862 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 CCDC3Q9BQI4 270 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 ADNPQ9H2P0 1102 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 CUEDC2Q9H467 287 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 SYNDIG1Q9H7V2 258 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 LRRC4CQ9HCJ2 640 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 EPB41L5Q9HCM4 733 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 CNGB3Q9NQW8 809 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 XPO7Q9UIA9 1087 aaKnown RBP10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 TSPAN16Q9UKR8 245 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 HS3ST3A1Q9Y663 406 aa10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 MORC2Q9Y6X9 1032 aaPredicted RBP10.73□□□□□ -0.69
CTDNEP1-202ENST00000570380 H3BM21 787 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 RNF103O00237 685 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 ALOX15BO15296 676 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 RAD51BO15315 384 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 NVLO15381 856 aaKnown RBP10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 ATP9BO43861 1147 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 NR3C1P04150 777 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 CTSLP07711 333 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 TRIM49P0CI25 452 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 TRIM49CP0CI26 452 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 LCP1P13796 627 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 PDGFRAP16234 1089 aa10.72□□□□□ -0.69
CTDNEP1-202ENST00000570380 ZNF18P17022 549 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms