RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TBC1D3G	Q6DHY5	549 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	TBC1D3C	Q6IPX1	549 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	ANKS1B	Q7Z6G8	1248 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	TBC1D3	Q8IZP1	549 aa	Predicted RBP	3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	SPEM1	Q8N4L4	309 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	ADAMTS14	Q8WXS8	1223 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	RTP4	Q96DX8	246 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	MCRS1	Q96EZ8	462 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	STK33	Q9BYT3	514 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	DDX31	Q9H8H2	851 aa	Known RBP	3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	ZNF304	Q9HCX3	659 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	PLSCR4	Q9NRQ2	329 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	ZDHHC7	Q9NXF8	308 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	MAGED2	Q9UNF1	606 aa	Predicted RBP	3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	PKP3	Q9Y446	797 aa		3.68	□□□□□ -1.82
UBR1-209	ENST00000569243	SRRM3	A6NNA2	597 aa	Predicted RBP	3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	ERI2	A8K979	691 aa	Known RBP	3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	STMND1	H3BQB6	276 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	SOCS5	O75159	536 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	AK2	P54819	239 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	BTK	Q06187	659 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	KIF19	Q2TAC6	998 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	LCE3A	Q5TA76	89 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	WBP2NL	Q6ICG8	309 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	RINT1	Q6NUQ1	792 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243		Q6ZSV7	163 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	CREB3L2	Q70SY1	520 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	ZNF367	Q7RTV3	350 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	ARMC9	Q7Z3E5	817 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	RIPOR3	Q96MK2	946 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	TMEM120A	Q9BXJ8	343 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	EPS8L2	Q9H6S3	715 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	ARNT2	Q9HBZ2	717 aa		3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	PLEKHB1	Q9UF11	243 aa	Predicted RBP	3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	TRPC5	Q9UL62	973 aa	Predicted RBP	3.67	□□□□□ -1.82
UBR1-209	ENST00000569243	C17orf102	A2RUQ5	167 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	NCK2	O43639	380 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	LIAS	O43766	372 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	KRT18	P05783	430 aa	Known RBP	3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	MYL1	P05976	194 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	NBPF7	P0C2Y1	421 aa	Predicted RBP	3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	UNG	P13051	313 aa	Predicted RBP	3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	DAO	P14920	347 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	AVPR1A	P37288	418 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	AMT	P48728	403 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	HSPA7	P48741	367 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	DDR1	Q08345	913 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	COASY	Q13057	564 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	PICALM	Q13492	652 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	HLF	Q16534	295 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	LONRF1	Q17RB8	773 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	MPEG1	Q2M385	716 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	HEPHL1	Q6MZM0	1159 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	H1FNT	Q75WM6	255 aa	Predicted RBP	3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	TMEM200A	Q86VY9	491 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	CCDC25	Q86WR0	208 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	TCP11L2	Q8N4U5	519 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	OR14A16	Q8NHC5	309 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	DEPTOR	Q8TB45	409 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	HDAC7	Q8WUI4	952 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	CCDC138	Q96M89	665 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	FRMD8	Q9BZ67	464 aa	Predicted RBP	3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	HIPK3	Q9H422	1215 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	LIN7C	Q9NUP9	197 aa	Known RBP	3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	FBXO4	Q9UKT5	387 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	RAB21	Q9UL25	225 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	PHTF1	Q9UMS5	762 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	CNTN6	Q9UQ52	1028 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	MMP24	Q9Y5R2	645 aa		3.66	□□□□□ -1.82
UBR1-209	ENST00000569243	MST1R	Q04912	1400 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC38A8	A6NNN8	435 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	PRC1	O43663	620 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	ENO3	P13929	434 aa	Predicted RBP	3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	PKP1	Q13835	747 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	ZACN	Q401N2	412 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	C5orf22	Q49AR2	442 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	GATAD2A	Q86YP4	633 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	RFLNB	Q8N5W9	214 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM110D	Q8TAY7	271 aa	Predicted RBP	3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC35F5	Q8WV83	523 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	FRG2B	Q96QU4	278 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	C1QTNF4	Q9BXJ3	329 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	POLDIP3	Q9BY77	421 aa	Known RBP	3.65	□□□□□ -1.83
UBR1-209	ENST00000569243	CERS4	Q9HA82	394 aa		3.65	□□□□□ -1.83
UBR1-209	ENST00000569243		A0A1B0GVY2	172 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	EFCAB8	A8MWE9	144 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	KIF28P	B7ZC32	967 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	RNMT	O43148	476 aa	Known RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	KIF1C	O43896	1103 aa	Known RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	ZBTB11	O95625	1053 aa	Predicted RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	ZNF12	P17014	697 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	PRKCH	P24723	683 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	KLRC2	P26717	231 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	KLRK1	P26718	216 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	PCP4	P48539	62 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	CYP2J2	P51589	502 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	NUDT6	P53370	316 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	TBX4	P57082	545 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM3B	P58499	235 aa	Predicted RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	TUBA1B	P68363	451 aa		3.64	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms