RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ASS1P00966 412 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 ATP5BP06576 529 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 GJB1P08034 283 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ADRA2BP18089 450 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 IREB2P48200 963 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 CTBP1Q13363 440 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 CEACAM7Q14002 265 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 CAPRIN1Q14444 709 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 ZNF460Q14592 562 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 TCEAL1Q15170 157 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 CA9Q16790 459 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ATF7IP2Q5U623 682 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 RAB44Q7Z6P3 723 aaPredicted RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 KCNMB4Q86W47 210 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 SIAH1Q8IUQ4 282 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 SLC7A5P1Q8MH63 180 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 CENPSQ8N2Z9 138 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 MARVELD2Q8N4S9 558 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 CANT1Q8WVQ1 401 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ARHGEF4Q9NR80 690 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ABCB10Q9NRK6 738 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 BAG5Q9UL15 447 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 SLC8A2Q9UPR5 921 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 CLK1P49759 484 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 SEPHS1P49903 392 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 NEK2P51955 445 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 KPNA2P52292 529 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 CDH13P55290 713 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 ZNF252P-AS1Q0IIN9 211 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 PABPC1LQ4VXU2 614 aaKnown RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 MBLAC2Q68D91 279 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 FAM183BPQ6ZVS7 135 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 TNIP2Q8NFZ5 429 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 TAMM41Q96BW9 452 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 XPR1Q9UBH6 696 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 FETUBQ9UGM5 382 aa11.09□□□□□ -0.63
PALB2-206ENST00000568219 GPC6Q9Y625 555 aaPredicted RBP11.09□□□□□ -0.63
PALB2-206ENST00000568219 ADGRA2Q96PE1 1338 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 GOLGA4Q13439 2230 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 MMP10P09238 476 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 FGF3P11487 239 aaPredicted RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 STMN1P16949 149 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 GOT1P17174 413 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 PGAM1P18669 254 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 NDST2P52849 883 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 STXBP2Q15833 593 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 PAGE2BQ5JRK9 111 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 KCTD8Q6ZWB6 473 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 RPS27LQ71UM5 84 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 KBTBD6Q86V97 674 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 SLC41A1Q8IVJ1 513 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 PLD6Q8N2A8 252 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 SHCBP1Q8NEM2 672 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 TRAPPC12Q8WVT3 735 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 DCPSQ96C86 337 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 CELF6Q96J87 481 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 IQCA1LA6NCM1 817 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 NEMP2A6NFY4 417 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 E7ENX8 843 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 TIMM44O43615 452 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 TADA2AO75478 443 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 DHRS4L1P0CG22 281 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 TSHRP16473 764 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 ACO1P21399 889 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 CDK9P50750 372 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 ZNF143P52747 638 aaPredicted RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 AP3M2P53677 418 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 MGAT5BQ3V5L5 792 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 CERCAMQ5T4B2 595 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 CAND1Q86VP6 1230 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 PSMA8Q8TAA3 256 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 OLIG1Q8TAK6 271 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 MAPK15Q8TD08 544 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 TRIM8Q9BZR9 551 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 MARCH7Q9H992 704 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 SPAG4Q9NPE6 437 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 VPS51Q9UID3 782 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 RAP2CQ9Y3L5 183 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 C3orf70A6NLC5 250 aaPredicted RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 H0Y626 953 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 NRP2O60462 931 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 SNX2O60749 519 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 TRIM16O95361 564 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 SAMD4BQ5PRF9 694 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 GRTP1Q5TC63 336 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 FSTL4Q6MZW2 842 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 DUS1LQ6P1R4 473 aaKnown RBP11.08□□□□□ -0.64
PALB2-206ENST00000568219 PGAM4Q8N0Y7 254 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 PCDH19Q8TAB3 1148 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 APBB2Q92870 758 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 POMKQ9H5K3 350 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 WDR70Q9NW82 654 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 DNAJC28Q9NX36 388 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
PALB2-206ENST00000568219 SH3PXD2BA1X283 911 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 EEF2KO00418 725 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms