RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 FRS2Q8WU20 508 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 PRCCQ92733 491 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 FAM129BQ96TA1 746 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 ACE2Q9BYF1 805 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 KLC2Q9H0B6 622 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 RETREG1Q9H6L5 497 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 NOL6Q9H6R4 1146 aaKnown RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 CATSPERBQ9H7T0 1116 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 ATP13A1Q9HD20 1204 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 CWC15Q9P013 229 aaKnown RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 RAB23Q9ULC3 237 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 CYP8B1Q9UNU6 501 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 SMG5Q9UPR3 1016 aaKnown RBP13.32□□□□□ -0.28
CNOT1-213ENST00000568158 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
CNOT1-213ENST00000568158 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 EDDM13A0A1B0GTR0 161 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 EIF3CLB5ME19 914 aaKnown RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 MAP3K13O43283 966 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 DAPK3O43293 454 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 ATP9BO43861 1147 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 CD160O95971 181 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 ERCC2P18074 760 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 FECHP22830 423 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 CYLC1P35663 651 aaPredicted RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 TAS2R40P59535 323 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 RPS14P62263 151 aaKnown RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 SLC25A11Q02978 314 aaKnown RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 POLD3Q15054 466 aaPredicted RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 LEKR1Q6ZMV7 388 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 PSTKQ8IV42 348 aaKnown RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 TMEFF1Q8IYR6 380 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 SH2D3CQ8N5H7 860 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 DCAF4L2Q8NA75 395 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 ATP11CQ8NB49 1132 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 ZC3H10Q96K80 434 aaKnown RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 C2orf49Q9BVC5 232 aaPredicted RBP13.31□□□□□ -0.28
CNOT1-213ENST00000568158 MAGEH1Q9H213 219 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 IMPACTQ9P2X3 320 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 INTUQ9ULD6 942 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 VPS13AQ96RL7 3174 aa13.31□□□□□ -0.28
CNOT1-213ENST00000568158 SPAG17Q6Q759 2223 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 IGHV1OR15-9A0A0B4J2B8 117 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 BNIP3LO60238 219 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 RAMP2O60895 175 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 ZNF217O75362 1048 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 NDUFA10O95299 355 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 ACADMP11310 421 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 AMPD1P23109 780 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 GJC1P36383 396 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 ARF5P84085 180 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 BYSLQ13895 437 aaKnown RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 HADHQ16836 314 aaKnown RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 RFX8Q6ZV50 586 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 POLNQ7Z5Q5 900 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 MMAAQ8IVH4 418 aaKnown RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 CELF6Q96J87 481 aaKnown RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 BAG1Q99933 345 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 SLC39A8Q9C0K1 460 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 RSPH9Q9H1X1 276 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-213ENST00000568158 PCDH18Q9HCL0 1135 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 CEP192Q8TEP8 1941 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 CHD5Q8TDI0 1954 aa13.3□□□□□ -0.28
CNOT1-213ENST00000568158 RALGAPA1Q6GYQ0 2036 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 RASA4BC9J798 803 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 FGF10O15520 208 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 RASA4O43374 803 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 KDELR3O43731 214 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 MTA2O94776 668 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 RHOBTB1O94844 696 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 CD48P09326 243 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 HTR7P34969 479 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 NOP2P46087 812 aaKnown RBP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 HCAR3P49019 387 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 TPMTP51580 245 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 CDH6P55285 790 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 YBEYP58557 167 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 SLC20A2Q08357 652 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 MMRN1Q13201 1228 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 SPA17Q15506 151 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 DPYSL2Q16555 572 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 ZNF776Q68DI1 518 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 LAIR1Q6GTX8 287 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 RETSATQ6NUM9 610 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 Q6ZVU0 165 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 FAM124AQ86V42 546 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 ZNF354CQ86Y25 554 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 TP53INP2Q8IXH6 220 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 RHOT2Q8IXI1 618 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 UMODL1-AS1Q8N2C9 162 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 TEKT4Q8WW24 435 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 RFFLQ8WZ73 363 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 HMCESQ96FZ2 354 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 SPACA7Q96KW9 195 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 ARRDC1-AS1Q9H2J1 176 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms