RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DMXL2Q8TDJ6 3036 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 NCOR2Q9Y618 2525 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CNOT1A5YKK6 2376 aaKnown RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 COL5A1P20908 1838 aaPredicted RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 A0A1W2PP55 124 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 FAM47DPA6NHR8 397 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 C2CD4BA6NLJ0 364 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 DRGXA6NNA5 263 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 E9PAM4 449 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 C1QTNF3-AMACRE9PGA6 284 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 I6L893 689 aaPredicted RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 MCF2LO15068 1137 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ALOX15BO15296 676 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 SLC7A4O43246 635 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ATP9BO43861 1147 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CNTN5O94779 1100 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ENDOD1O94919 500 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 FSBPO95073 299 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 IL1BP01584 269 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CALB1P05937 261 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 IGHV4-34P06331 123 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 RHOCP08134 193 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CCDC172P0C7W6 258 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CD59P13987 128 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 VAV1P15498 845 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 GOT1P17174 413 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CHRNB2P17787 502 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 OR1E1P30953 314 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 SDC4P31431 198 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 SLC8A1P32418 973 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 GGCXP38435 758 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 PTPN9P43378 593 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 NSFP46459 744 aaKnown RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 GRIA4P48058 902 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 PSMD8P48556 350 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 NUMBP49757 651 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 IRAK1P51617 712 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 GALCP54803 685 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ADPRHP54922 357 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 RACK1P63244 317 aaKnown RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 ATP11AP98196 1134 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 NRG1Q02297 640 aaPredicted RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 PTP4A2Q12974 167 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CLEC16AQ2KHT3 1053 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ARL13BQ3SXY8 428 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ACCSLQ4AC99 568 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ANO6Q4KMQ2 910 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ALFQ53S48 1182 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 C6orf118Q5T5N4 469 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 FAM46CQ5VWP2 391 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 KIAA0895LQ68EN5 471 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 TRNP1Q6NT89 227 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 NCEH1Q6PIU2 408 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ZNF783Q6ZMS7 281 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 STRADAQ7RTN6 431 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 DSG4Q86SJ6 1040 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 FAM131BQ86XD5 332 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 PHF13Q86YI8 300 aaPredicted RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 NAXDQ8IW45 347 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 STK40Q8N2I9 435 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 SH2D3CQ8N5H7 860 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 AADATQ8N5Z0 425 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 AOPEPQ8N6M6 819 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 EMC1Q8N766 993 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 OR52K2Q8NGK3 314 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 OR2I1PQ8NGU4 316 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 OR2T34Q8NGX1 318 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 SLC30A5Q8TAD4 765 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 GANCQ8TET4 914 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 OR8D1Q8WZ84 308 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CCDC114Q96M63 670 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CFAP57Q96MR6 1250 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 PSMB7Q99436 277 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 C11orf70Q9BRQ4 267 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ZYG11BQ9C0D3 744 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 NEUROG2Q9H2A3 272 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 HSD3B7Q9H2F3 369 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 RETREG1Q9H6L5 497 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 GAREM1Q9H706 876 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 TM9SF3Q9HD45 589 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ANLNQ9NQW6 1124 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 ADAM22Q9P0K1 906 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 TMEM63CQ9P1W3 806 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 PPARGC1AQ9UBK2 798 aaKnown RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 SERGEFQ9UGK8 458 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 WASF3Q9UPY6 502 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 HS3ST2Q9Y278 367 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 PCDHGB2Q9Y5G2 931 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 CFAP47Q6ZTR5 3102 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 KMT2BQ9UMN6 2715 aaPredicted RBP4.91□□□□□ -1.62
CLK3-219ENST00000567805 ZZEF1O43149 2961 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
CLK3-219ENST00000567805 SPTBN2O15020 2390 aa4.9□□□□□ -1.62
CLK3-219ENST00000567805 ANKRD36A6QL64 1941 aa4.9□□□□□ -1.62
CLK3-219ENST00000567805 A0A0D9SEW6 157 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 CXorf51AA0A1B0GTR3 108 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 A0A1B0GVT2 93 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 A0A1W2PPC4 97 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 FAM170AA1A519 330 aa4.9□□□□□ -1.63
CLK3-219ENST00000567805 ILVBLA1L0T0 632 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms