RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 KBTBD12Q3ZCT8 623 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 LILRA6Q6PI73 481 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 SPRED2Q7Z698 418 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 SRRM1Q8IYB3 904 aaKnown RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 ELMOD1Q8N336 334 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 POF1BQ8WVV4 589 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 OXNAD1Q96HP4 312 aaPredicted RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 ZNF419Q96HQ0 510 aaPredicted RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 PRICKLE1Q96MT3 831 aaPredicted RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 PLAC1Q9HBJ0 212 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 GLOD4Q9HC38 313 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 RBM22Q9NW64 420 aaKnown RBP eCLIP11.97□□□□□ -0.49
BBS4-213ENST00000567279 SYBUQ9NX95 663 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 FETUBQ9UGM5 382 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 PCDHA11Q9Y5I1 949 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 ZFP37Q9Y6Q3 630 aaPredicted RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 GBF1Q92538 1859 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 SDR42E2A6NKP2 422 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 J3KR12 359 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 TSPAN3O60637 253 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 LPXNO60711 386 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 SUN1O94901 812 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 KLKB1P03952 638 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 GSTA2P09210 222 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 KRT15P19012 456 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 DNAJB1P25685 340 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 MSH2P43246 934 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 SMAD3P84022 425 aaKnown RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 POLD3Q15054 466 aaPredicted RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 PARP15Q460N3 678 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 PABPC1LQ4VXU2 614 aaKnown RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 KCTD11Q693B1 232 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 TXNDC8Q6A555 127 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 TMC8Q8IU68 726 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 ARL14EPQ8N8R7 260 aaPredicted RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 DNAAF3Q8N9W5 541 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 TTC16Q8NEE8 873 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 SPATA22Q8NHS9 363 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 GSDMBQ8TAX9 411 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 MDM1Q8TC05 714 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 MAML1Q92585 1016 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 MRPS31Q92665 395 aaKnown RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 PABPC5Q96DU9 382 aaKnown RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 SLC22A12Q96S37 553 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 CYP2S1Q96SQ9 504 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 HTATIP2Q9BUP3 242 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 LRRC40Q9H9A6 602 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 NT5MQ9NPB1 228 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 TLR9Q9NR96 1032 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 AGO1Q9UL18 857 aaKnown RBP11.97□□□□□ -0.49
BBS4-213ENST00000567279 RWDD3Q9Y3V2 267 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 CPQQ9Y646 472 aa11.97□□□□□ -0.49
BBS4-213ENST00000567279 MTCL1Q9Y4B5 1905 aaKnown RBP11.96□□□□□ -0.49
BBS4-213ENST00000567279 C2orf71A6NGG8 1288 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 SCAMP3O14828 347 aaKnown RBP11.96□□□□□ -0.49
BBS4-213ENST00000567279 CCL16O15467 120 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 CREB1P16220 341 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 ACVRL1P37023 503 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 NUMBP49757 651 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 SGSHP51688 502 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 RPS24P62847 133 aaKnown RBP11.96□□□□□ -0.49
BBS4-213ENST00000567279 C5orf22Q49AR2 442 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 ZNF771Q7L3S4 317 aaPredicted RBP11.96□□□□□ -0.49
BBS4-213ENST00000567279 PRPF39Q86UA1 669 aaKnown RBP11.96□□□□□ -0.49
BBS4-213ENST00000567279 CTAGE3PQ8IX95 158 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 SPPL3Q8TCT6 385 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 MICAL1Q8TDZ2 1067 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 SLC22A17Q8WUG5 538 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 NSMCE1Q8WV22 266 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 AZIN2Q96A70 460 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 ZFRQ96KR1 1074 aaKnown RBP11.96□□□□□ -0.49
BBS4-213ENST00000567279 GCNAQ96QF7 691 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 FCRL5Q96RD9 977 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 CASS4Q9NQ75 786 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 SAMD15Q9P1V8 674 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 IKBKGQ9Y6K9 419 aa11.96□□□□□ -0.49
BBS4-213ENST00000567279 PSMD3O43242 534 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 ARHGEF15O94989 841 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 MT-CYBP00156 380 aaPredicted RBP11.95□□□□□ -0.5
BBS4-213ENST00000567279 INHBAP08476 426 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 MYL4P12829 197 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 MYOGP15173 224 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 CHN1P15882 459 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 PGAM1P18669 254 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 GEMP55040 296 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 CDH4P55283 916 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 YBEYP58557 167 aaPredicted RBP11.95□□□□□ -0.5
BBS4-213ENST00000567279 NR1H3Q13133 447 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 PPM1LQ5SGD2 360 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 STEAP4Q687X5 459 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 LEKR1Q6ZMV7 388 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 GAREM2Q75VX8 874 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 TRABD2AQ86V40 505 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 PPM1NQ8N819 430 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 MRPL43Q8N983 215 aaKnown RBP11.95□□□□□ -0.5
BBS4-213ENST00000567279 IPMKQ8NFU5 416 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 DCAKDQ8WVC6 231 aa11.95□□□□□ -0.5
BBS4-213ENST00000567279 DDX50Q9BQ39 737 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms