RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 GORASP1Q9BQQ3 440 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 TTPALQ9BTX7 342 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 OSBPL1AQ9BXW6 950 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 GMIPQ9P107 970 aa23.76■■□□□ 1.39
LINC00543-201ENST00000567234 WDR27A2RRH5 827 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 AP3B1O00203 1094 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 KRT38O76015 456 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 LINGO3P0C6S8 592 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 HAPLN1P10915 354 aaPredicted RBP23.75■■□□□ 1.39
LINC00543-201ENST00000567234 CNTFP26441 200 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 CD68P34810 354 aaPredicted RBP23.75■■□□□ 1.39
LINC00543-201ENST00000567234 RASSF2P50749 326 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 ZBTB17Q13105 803 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 ACBD5Q5T8D3 534 aaPredicted RBP23.75■■□□□ 1.39
LINC00543-201ENST00000567234 HHATQ5VTY9 493 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 CWF19L1Q69YN2 538 aaKnown RBP23.75■■□□□ 1.39
LINC00543-201ENST00000567234 ARHGAP12Q8IWW6 846 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 FBXO32Q969P5 355 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 TLR8Q9NR97 1041 aaKnown RBP23.75■■□□□ 1.39
LINC00543-201ENST00000567234 SMYD2Q9NRG4 433 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 FGFR1OP2Q9NVK5 253 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 HS3ST4Q9Y661 456 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 E9PAM4 449 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 CACNG3O60359 315 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 MGAT1P26572 445 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 FOXN2P32314 431 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 TBX4P57082 545 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 RPL10AP62906 217 aaKnown RBP23.75■■□□□ 1.39
LINC00543-201ENST00000567234 SLC1A5Q15758 541 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 TSNAXIP1Q2TAA8 658 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 RTP2Q5QGT7 225 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 AFMIDQ63HM1 303 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 DEFB128Q7Z7B8 93 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.75■■□□□ 1.39
LINC00543-201ENST00000567234 KIRREL3Q8IZU9 778 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 TTC9BQ8N6N2 239 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 OXNAD1Q96HP4 312 aaPredicted RBP23.75■■□□□ 1.39
LINC00543-201ENST00000567234 CASS4Q9NQ75 786 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 TMEM39AQ9NV64 488 aa23.75■■□□□ 1.39
LINC00543-201ENST00000567234 F5H423 210 aaPredicted RBP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 CLTBP09497 229 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 DNAJB2P25686 324 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 ITGB8P26012 769 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 TUBP50607 506 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 SESN2P58004 480 aaPredicted RBP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 PRPSAP1Q14558 356 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 CASC4Q6P4E1 433 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 TRMT10BQ6PF06 316 aaKnown RBP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 MARK2Q7KZI7 788 aaKnown RBP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 ATPAF2Q8N5M1 289 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 RTL3Q8N8U3 475 aaKnown RBP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 SPDYE1Q8NFV5 336 aaPredicted RBP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 DEPDC1BQ8WUY9 529 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 APOPT1Q96IL0 206 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 CELF6Q96J87 481 aaKnown RBP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 B3GALT6Q96L58 329 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 FAM210AQ96ND0 272 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 AGAP3Q96P47 875 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 PPP1R2P1Q96PQ5 205 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 TSC22D3Q99576 134 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 PAIP2Q9BPZ3 127 aaKnown RBP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.74■■□□□ 1.39
LINC00543-201ENST00000567234 NUDT5Q9UKK9 219 aa23.74■■□□□ 1.39
LINC00543-201ENST00000567234 EFEMP2O95967 443 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 PAPOLAP51003 745 aaKnown RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 ARPP19P56211 112 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 MTA1Q13330 715 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 FRG1Q14331 258 aaKnown RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 TRIP4Q15650 581 aaPredicted RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 SEPT7Q16181 437 aaKnown RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 LVRNQ6Q4G3 990 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 RSPO2Q6UXX9 243 aaPredicted RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 RNF19BQ6ZMZ0 732 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 GALNT15Q8N3T1 639 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 RNF217Q8TC41 542 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 CDKL2Q92772 493 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 SERAC1Q96JX3 654 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 HCSTQ9UBK5 93 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 ALPK3Q96L96 1907 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 ARHGAP42A6NI28 874 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 TRIM49D1C9J1S8 452 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 TRAFD1O14545 582 aaPredicted RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 SKAP2O75563 359 aaPredicted RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 VNN2O95498 520 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 JCHAINP01591 159 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 NFKB1P19838 968 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 SETDB1Q15047 1291 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 MGAT5BQ3V5L5 792 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 SPANXN3Q5MJ09 141 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 TIGD7Q6NT04 549 aaPredicted RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 ATP6V0D2Q8N8Y2 350 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 TCP10LQ8TDR4 215 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 VPS11Q9H270 941 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 VCXQ9H320 206 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 LRRC40Q9H9A6 602 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 MKS1Q9NXB0 559 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 BFARQ9NZS9 450 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 PPARGC1AQ9UBK2 798 aaKnown RBP23.73■■□□□ 1.39
LINC00543-201ENST00000567234 ASB3Q9Y575 518 aa23.73■■□□□ 1.39
LINC00543-201ENST00000567234 NT5C1B-RDH14C9J2C7 533 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms