RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 SYPL2Q5VXT5 272 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 RNF219Q5W0B1 726 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-214ENST00000566230 RAP1GAP2Q684P5 730 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 CAVIN1Q6NZI2 390 aaKnown RBP13.79□□□□□ -0.2
COMMD4-214ENST00000566230 TAC4Q86UU9 113 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 CCDC117Q8IWD4 279 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-214ENST00000566230 KAT5Q92993 513 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 TUBGCP2Q9BSJ2 902 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 KDM4CQ9H3R0 1056 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 DMTF1Q9Y222 760 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 PCDHB4Q9Y5E5 795 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 SPTA1P02549 2419 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 KIF26BQ2KJY2 2108 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 CYSRT1A8MQ03 144 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 FBXO21O94952 628 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 GIMD1P0DJR0 217 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 PDGFRAP16234 1089 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 TACR2P21452 398 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 NUDT1P36639 197 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 RPL34P49207 117 aaKnown RBP13.78□□□□□ -0.2
COMMD4-214ENST00000566230 GCNT1Q02742 428 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 CNTN1Q12860 1018 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 OVGP1Q12889 678 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 STAT4Q14765 748 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 VWA3BQ502W6 1294 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 ZC3H12AQ5D1E8 599 aaKnown RBP13.78□□□□□ -0.2
COMMD4-214ENST00000566230 AGBL4Q5VU57 503 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 CDCP2Q5VXM1 449 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 GBP6Q6ZN66 633 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 TRIM69Q86WT6 500 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 NAF1Q96HR8 494 aaKnown RBP13.78□□□□□ -0.2
COMMD4-214ENST00000566230 HIC2Q96JB3 615 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 SPAG5Q96R06 1193 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 LGMNQ99538 433 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 NDST4Q9H3R1 872 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 SAMSN1Q9NSI8 373 aaKnown RBP13.78□□□□□ -0.2
COMMD4-214ENST00000566230 UCKL1Q9NWZ5 548 aa13.78□□□□□ -0.2
COMMD4-214ENST00000566230 PRAMEF26H0Y7S4 382 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 J3QKU1 62 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 ERVH48-1M5A8F1 160 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 SLC7A4O43246 635 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 MAGEC1O60732 1142 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 DGKAP23743 735 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 NNMTP40261 264 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 PLK1P53350 603 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 TAS2R38P59533 333 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 PITX1P78337 314 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-214ENST00000566230 TYRO3Q06418 890 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 SLC12A1Q13621 1099 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 POM121L1PQ3SYA9 428 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 TCP11X2Q5H9J9 407 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 ENOSF1Q7L5Y1 443 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 CHSY1Q86X52 802 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 CIR1Q86X95 450 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-214ENST00000566230 COL27A1Q8IZC6 1860 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-214ENST00000566230 CCAR2Q8N163 923 aaKnown RBP13.77□□□□□ -0.21
COMMD4-214ENST00000566230 PPM1KQ8N3J5 372 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 OR4C6Q8NH72 309 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 ALG14Q96F25 216 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 KLHDC7BQ96G42 594 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 PRMT1Q99873 361 aaKnown RBP13.77□□□□□ -0.21
COMMD4-214ENST00000566230 TRPM6Q9BX84 2022 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 CPNE5Q9HCH3 593 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 PPM1HQ9ULR3 514 aa13.77□□□□□ -0.21
COMMD4-214ENST00000566230 RP1P56715 2156 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 LRRC10BA6NIK2 292 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 ATP9BO43861 1147 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 OPA1O60313 960 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 IGLV3-25P01717 112 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 MPOP05164 745 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 TPM2P07951 284 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 MYF5P13349 255 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 GPD2P43304 727 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-214ENST00000566230 DAB2P98082 770 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 SULT2A1Q06520 285 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 EIF4EBP2Q13542 120 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-214ENST00000566230 STILQ15468 1287 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 EXOC3L4Q17RC7 722 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 CXorf57Q6NSI4 855 aaKnown RBP13.76□□□□□ -0.21
COMMD4-214ENST00000566230 BEND5Q7L4P6 421 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 TMEM145Q8NBT3 493 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 ZNF248Q8NDW4 579 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 OR52K2Q8NGK3 314 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 FAM149B1Q96BN6 582 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 BTN2A3PQ96KV6 586 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 ZNF578Q96N58 590 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-214ENST00000566230 BPIFA3Q9BQP9 254 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 SEMA4CQ9C0C4 833 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 UBE2TQ9NPD8 197 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-214ENST00000566230 KLHL11Q9NVR0 708 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 FANCLQ9NW38 375 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 TJP2Q9UDY2 1190 aa13.76□□□□□ -0.21
COMMD4-214ENST00000566230 LY6G6EA0A0G2JKS1 128 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 A0A1B0GVM2 712 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 SMTNL1A8MU46 457 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 KCNU1A8MYU2 1149 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 MCF2LO15068 1137 aa13.75□□□□□ -0.21
COMMD4-214ENST00000566230 SLC31A1O15431 190 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms