RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 BAIAP3O94812 1187 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 F9P00740 461 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 CHRM4P08173 479 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 FCGR2AP12318 317 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 BMP5P22003 454 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 CHRNA5P30532 468 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 MAN1A1P33908 653 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 SLC12A2P55011 1212 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 PROK1P58294 105 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 GALNT3Q14435 633 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 SLC18A3Q16572 532 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 ZNF766Q5HY98 468 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 FAM171A1Q5VUB5 890 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 ZNF782Q6ZMW2 699 aaPredicted RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 ZNF788Q6ZQV5 615 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 H1FNTQ75WM6 255 aaPredicted RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 MON1AQ86VX9 555 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 SCAIQ8N9R8 606 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 SETD9Q8NE22 299 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 RAB40AQ8WXH6 277 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 MPHOSPH8Q99549 860 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 EPHX3Q9H6B9 360 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 PPP1R14DQ9NXH3 145 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 MAP3K20Q9NYL2 800 aaKnown RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 HCN3Q9P1Z3 774 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 DHDHQ9UQ10 334 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 CAMK2AQ9UQM7 478 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 OSGIN2Q9Y236 505 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 ARHGEF17Q96PE2 2063 aaPredicted RBP5.07□□□□□ -1.6
LINC00560-201ENST00000564593 WDR17Q8IZU2 1322 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 CYP2D7A0A087X1C5 515 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 A0A1W2PPH5 198 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 TMEM247A6NEH6 219 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 GAGE10A6NGK3 116 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 TEX22C9J3V5 150 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 CBX6O95503 412 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 PRKCGP05129 697 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 CAPN3P20807 821 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 CD72P21854 359 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 SKIV2L2P42285 1042 aaKnown RBP5.07□□□□□ -1.6
LINC00560-201ENST00000564593 CASP2P42575 452 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 PTPN9P43378 593 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 CYP2J2P51589 502 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 HSF1Q00613 529 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 TSTQ16762 297 aaKnown RBP5.07□□□□□ -1.6
LINC00560-201ENST00000564593 C5orf22Q49AR2 442 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 EARS2Q5JPH6 523 aaKnown RBP5.07□□□□□ -1.6
LINC00560-201ENST00000564593 CCDC30Q5VVM6 783 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 MIS18BP1Q6P0N0 1132 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 CYB5R4Q7L1T6 521 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 ADGRF4Q8IZF3 695 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 GHDCQ8N2G8 530 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 TMEM217Q8N7C4 229 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 TDRD7Q8NHU6 1098 aaKnown RBP5.07□□□□□ -1.6
LINC00560-201ENST00000564593 NELL1Q92832 810 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 KIF1BPQ96EK5 621 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 PDCL3Q9H2J4 239 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 R3HDMLQ9H3Y0 253 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 NAALADL1Q9UQQ1 740 aa5.07□□□□□ -1.6
LINC00560-201ENST00000564593 OR6C68A6NDL8 312 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 URODP06132 367 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 CCR9P51686 369 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 SLC10A2Q12908 348 aaPredicted RBP5.06□□□□□ -1.6
LINC00560-201ENST00000564593 STIM1Q13586 685 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 PRICKLE4Q2TBC4 344 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 PLK5Q496M5 336 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 FBXO43Q4G163 708 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 KIAA1755Q5JYT7 1200 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 VWA5B1Q5TIE3 1220 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 HAUS3Q68CZ6 603 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 LRIG3Q6UXM1 1119 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 PTF1AQ7RTS3 328 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 RD3Q7Z3Z2 195 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 NFKBIDQ8NI38 313 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 BCAS4Q8TDM0 211 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 HSPH1Q92598 858 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 IFT27Q9BW83 186 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 FRMD8Q9BZ67 464 aaPredicted RBP5.06□□□□□ -1.6
LINC00560-201ENST00000564593 SLC25A18Q9H1K4 315 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 SLC32A1Q9H598 525 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 WDR26Q9H7D7 661 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 MOV10Q9HCE1 1003 aaKnown RBP5.06□□□□□ -1.6
LINC00560-201ENST00000564593 SEMA4BQ9NPR2 832 aaPredicted RBP5.06□□□□□ -1.6
LINC00560-201ENST00000564593 PDGFCQ9NRA1 345 aa5.06□□□□□ -1.6
LINC00560-201ENST00000564593 ORC3Q9UBD5 711 aaPredicted RBP5.06□□□□□ -1.6
LINC00560-201ENST00000564593 DPPA5A6NC42 116 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 C2CD4BA6NLJ0 364 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 TMEM63AO94886 807 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 KLRC2P26717 231 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 KRT32Q14532 448 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 PGM5Q15124 567 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 MEX3CQ5U5Q3 659 aaKnown RBP5.05□□□□□ -1.6
LINC00560-201ENST00000564593 TMEM268Q5VZI3 342 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 ATF7IPQ6VMQ6 1270 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 C4orf50Q6ZRC1 276 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 NEK8Q86SG6 692 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 DNAAF1Q8NEP3 725 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 KAT2AQ92830 837 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 SCNM1Q9BWG6 230 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 USP44Q9H0E7 712 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms