RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 NSMCE1Q8WV22 266 aa22.43■■□□□ 1.18
LINC01960-201ENST00000563759 PABPC5Q96DU9 382 aaKnown RBP22.43■■□□□ 1.18
LINC01960-201ENST00000563759 RBM15Q96T37 977 aaKnown RBP eCLIP22.43■■□□□ 1.18
LINC01960-201ENST00000563759 DOCK8Q8NF50 2099 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 A0A0D9SEW6 157 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 GFRA2O00451 464 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 FSHRP23945 695 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 NUMBP49757 651 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 PMS2P54278 862 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 USP4Q13107 963 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 SEMA5AQ13591 1074 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 ZNF77Q15935 545 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 PARP6Q2NL67 630 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 TPGS1Q6ZTW0 290 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 RIN3Q8TB24 985 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 ARHGEF2Q92974 986 aaKnown RBP22.42■■□□□ 1.18
LINC01960-201ENST00000563759 IGSF9Q9P2J2 1179 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 HPCAL4Q9UM19 191 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 TBC1D30Q9Y2I9 924 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 C5orf42Q9H799 3197 aa22.42■■□□□ 1.18
LINC01960-201ENST00000563759 ILVBLA1L0T0 632 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 J3KR12 359 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 ZBTB24O43167 697 aaPredicted RBP22.41■■□□□ 1.18
LINC01960-201ENST00000563759 LUC7L3O95232 432 aaKnown RBP22.41■■□□□ 1.18
LINC01960-201ENST00000563759 CYBBP04839 570 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 GAD2Q05329 585 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 MPPE1Q53F39 396 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 IL31Q6EBC2 164 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 PPP1R21Q6ZMI0 780 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 GET4Q7L5D6 327 aaPredicted RBP22.41■■□□□ 1.18
LINC01960-201ENST00000563759 OR7D4Q8NG98 312 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 OR52K2Q8NGK3 314 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 TEKT5Q96M29 485 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 TXLNGYQ9BZA5 131 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 MUC3BQ9H195 1237 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 GBA3Q9H227 469 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 MAP2K7O14733 419 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 HSD17B3P37058 310 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 MAGEA6P43360 314 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 ARL4CP56559 192 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 IL10RBQ08334 325 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 LRIT3Q3SXY7 679 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 CXorf57Q6NSI4 855 aaKnown RBP22.41■■□□□ 1.18
LINC01960-201ENST00000563759 CENPUQ71F23 418 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 MFN1Q8IWA4 741 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 CCDC117Q8IWD4 279 aaPredicted RBP22.41■■□□□ 1.18
LINC01960-201ENST00000563759 NPAS3Q8IXF0 933 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 IL12RB2Q99665 862 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 SPON2Q9BUD6 331 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 ACBD3Q9H3P7 528 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 VIPAS39Q9H9C1 493 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 KIF9Q9HAQ2 790 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 CDH22Q9UJ99 828 aa22.41■■□□□ 1.18
LINC01960-201ENST00000563759 NFKB1P19838 968 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 TPSB2P20231 275 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 ETFBP38117 255 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 RENBPP51606 427 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 TPSAB1Q15661 275 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 RNF219Q5W0B1 726 aaPredicted RBP22.4■■□□□ 1.18
LINC01960-201ENST00000563759 SYCE2Q6PIF2 218 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 POTEHQ6S545 545 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 CELF5Q8N6W0 485 aaKnown RBP22.4■■□□□ 1.18
LINC01960-201ENST00000563759 MAML1Q92585 1016 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 FATE1Q969F0 183 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 ATP13A1Q9HD20 1204 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 SAYSD1Q9NPB0 183 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 LMCD1Q9NZU5 365 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 TBC1D14Q9P2M4 693 aa22.4■■□□□ 1.18
LINC01960-201ENST00000563759 TCF3P15923 654 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 HOXD9P28356 352 aaPredicted RBP22.39■■□□□ 1.18
LINC01960-201ENST00000563759 OXCT1P55809 520 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 HNRNPDQ14103 355 aaKnown RBP22.39■■□□□ 1.18
LINC01960-201ENST00000563759 MPP7Q5T2T1 576 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 CFAP58Q5T655 872 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 EP400NLQ6ZTU2 488 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 PDIK1LQ8N165 341 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 CNTD1Q8N815 330 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 FGF13Q92913 245 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 ZNF419Q96HQ0 510 aaPredicted RBP22.39■■□□□ 1.18
LINC01960-201ENST00000563759 CDC42EP4Q9H3Q1 356 aaKnown RBP22.39■■□□□ 1.18
LINC01960-201ENST00000563759 RBM22Q9NW64 420 aaKnown RBP eCLIP22.39■■□□□ 1.18
LINC01960-201ENST00000563759 PLK2Q9NYY3 685 aa22.39■■□□□ 1.18
LINC01960-201ENST00000563759 PRAMEF11O60813 436 aa22.39■■□□□ 1.17
LINC01960-201ENST00000563759 HOXB8P17481 243 aaPredicted RBP22.39■■□□□ 1.17
LINC01960-201ENST00000563759 CD68P34810 354 aaPredicted RBP22.39■■□□□ 1.17
LINC01960-201ENST00000563759 UAP1Q16222 522 aaPredicted RBP22.39■■□□□ 1.17
LINC01960-201ENST00000563759 MARC1Q5VT66 337 aa22.39■■□□□ 1.17
LINC01960-201ENST00000563759 ZNF783Q6ZMS7 281 aa22.39■■□□□ 1.17
LINC01960-201ENST00000563759 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.39■■□□□ 1.17
LINC01960-201ENST00000563759 PDCD7Q8N8D1 485 aaKnown RBP22.39■■□□□ 1.17
LINC01960-201ENST00000563759 FRMD8Q9BZ67 464 aaPredicted RBP22.39■■□□□ 1.17
LINC01960-201ENST00000563759 EIF2B3Q9NR50 452 aaKnown RBP22.39■■□□□ 1.17
LINC01960-201ENST00000563759 BRWD1Q9NSI6 2320 aa22.39■■□□□ 1.17
LINC01960-201ENST00000563759 A0A1W2PPC1 479 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 GOLGA6BA6NDN3 693 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 PEX11BO96011 259 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 HLA-DQB2P05538 268 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 FAM193AP78312 1265 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 PDIA2Q13087 525 aaKnown RBP22.38■■□□□ 1.17
LINC01960-201ENST00000563759 ADAM15Q13444 863 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms