RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SEC24DO94855 1032 aaPredicted RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 TNFAIP8O95379 198 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 ZNF286BP0CG31 522 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 GNL1P36915 607 aaPredicted RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 RPL14P50914 215 aaKnown RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 NIPAL4Q0D2K0 466 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 SEPT6Q14141 434 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 DGKDQ16760 1214 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 CELF3Q5SZQ8 465 aaKnown RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 KLHDC10Q6PID8 442 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 EPGNQ6UW88 154 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 SIX6OS1Q8N1H7 587 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 SLC7A14Q8TBB6 771 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 ARNTL2Q8WYA1 636 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 PKP2Q99959 881 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 UBAP1Q9NZ09 502 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 C6orf203Q9P0P8 240 aaPredicted RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 TUBGCP4Q9UGJ1 667 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 ARHGAP10A1A4S6 786 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 DYTNA2CJ06 578 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 DNAJA2O60884 412 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 PSMC3P17980 439 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 ACAT1P24752 427 aaKnown RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 XIAPP98170 497 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 SFSWAPQ12872 951 aaKnown RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 ZNF460Q14592 562 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 GEN1Q17RS7 908 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 SPANXN3Q5MJ09 141 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 UGT2A3Q6UWM9 527 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 KBTBD6Q86V97 674 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 ACVR1CQ8NER5 493 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 PDCD6IPQ8WUM4 868 aaKnown RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 LENG1Q96BZ8 264 aaPredicted RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 CELF6Q96J87 481 aaKnown RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 VPS39Q96JC1 886 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 BTBD9Q96Q07 612 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 RBBP8Q99708 897 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 CXCL16Q9H2A7 254 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 IL1RL2Q9HB29 575 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 TMEM233B4DJY2 109 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 TPST1O60507 370 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 TGFB3P10600 412 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 TFEBP19484 476 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 PROZP22891 400 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 AKAP5P24588 427 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
ABCA3-203ENST00000563623 LRRC8EQ6NSJ5 796 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 TTC16Q8NEE8 873 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 MID2Q9UJV3 735 aa12.04□□□□□ -0.48
ABCA3-203ENST00000563623 H3BNX3 289 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 CLDN5O00501 218 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 JCHAINP01591 159 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 LMO2P25791 158 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 MAGEA3P43357 314 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 GALK1P51570 392 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 TPI1P60174 286 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 MS4A2Q01362 244 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 BST2Q10589 180 aaKnown RBP12.03□□□□□ -0.48
ABCA3-203ENST00000563623 ADGRE1Q14246 886 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 INSCQ1MX18 579 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 GK5Q6ZS86 529 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 NANOGNBQ7Z5D8 188 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 SLC41A1Q8IVJ1 513 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 SPNS2Q8IVW8 549 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 CATSPER1Q8NEC5 780 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 KHSRPQ92945 711 aaKnown RBP eCLIP12.03□□□□□ -0.48
ABCA3-203ENST00000563623 ATP6V1E2Q96A05 226 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 LIN28AQ9H9Z2 209 aaKnown RBP12.03□□□□□ -0.48
ABCA3-203ENST00000563623 ZDHHC7Q9NXF8 308 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 ERAP1Q9NZ08 941 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 TMCC1O94876 653 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 MLNP12872 115 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 MAGEA6P43360 314 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 PLK1P53350 603 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 RALGDSQ12967 914 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 GRM3Q14832 879 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 PDZD4Q76G19 769 aaPredicted RBP12.03□□□□□ -0.48
ABCA3-203ENST00000563623 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
ABCA3-203ENST00000563623 SLC35F5Q8WV83 523 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 EXT2Q93063 718 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 ZBED3Q96IU2 234 aaPredicted RBP12.03□□□□□ -0.48
ABCA3-203ENST00000563623 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 ARHGEF37A1IGU5 675 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 ZBTB42B2RXF5 422 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 H3BSA7 217 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 DPYSL4O14531 572 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 HNRNPLP14866 589 aaKnown RBP eCLIP12.03□□□□□ -0.48
ABCA3-203ENST00000563623 LIMK2P53671 638 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 BCAT1P54687 386 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 NME5P56597 212 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 CEACAM7Q14002 265 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 MYBPC3Q14896 1274 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 RWDD4Q6NW29 188 aaKnown RBP12.03□□□□□ -0.48
ABCA3-203ENST00000563623 LCA5Q86VQ0 697 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 C17orf50Q8WW18 174 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 MTMR10Q9NXD2 777 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms