RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 DPYSQ14117 519 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 STARD3Q14849 445 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 DPYSL2Q16555 572 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 SMTNL2Q2TAL5 461 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 PLK5Q496M5 336 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 ATP13A4Q4VNC1 1196 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 USP39Q53GS9 565 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 KCNT1Q5JUK3 1230 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 LINGO4Q6UY18 593 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 RAD9BQ6WBX8 426 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 TMPRSS6Q8IU80 811 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 PSTKQ8IV42 348 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 CCDC170Q8IYT3 715 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 UMODL1-AS1Q8N2C9 162 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 PGBD3Q8N328 593 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 DCLK2Q8N568 766 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 SH2D3CQ8N5H7 860 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 DCAF4L2Q8NA75 395 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 FAM71BQ8TC56 605 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 TSC1Q92574 1164 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 VOPP1Q96AW1 172 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 EIF3CQ99613 913 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 EPAS1Q99814 870 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 NCAPGQ9BPX3 1015 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 RSPH9Q9H1X1 276 aaPredicted RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 PRDM16Q9HAZ2 1276 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 ITM2CQ9NQX7 267 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 CWC15Q9P013 229 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 SUN2Q9UH99 717 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 INTUQ9ULD6 942 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 MFHAS1Q9Y4C4 1052 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 CHD5Q8TDI0 1954 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 GVINP1Q7Z2Y8 2422 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 PLXND1Q9Y4D7 1925 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 RIF1Q5UIP0 2472 aaKnown RBP8.74□□□□□ -1.01
UBR1-204ENST00000563239 EDDM13A0A1B0GTR0 161 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 RCCD1A6NED2 376 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 RNF103O00237 685 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 EEF2KO00418 725 aaKnown RBP8.74□□□□□ -1.01
UBR1-204ENST00000563239 ERCC2P18074 760 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 HTR7P34969 479 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 MAGEA1P43355 309 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 HCAR3P49019 387 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 TPMTP51580 245 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 TPI1P60174 286 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 KRT83P78385 493 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 DLG2Q15700 870 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 BOLA3Q53S33 107 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 AFMIDQ63HM1 303 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 PMS2CLQ68D20 193 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 LAIR1Q6GTX8 287 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 KIAA1324Q6UXG2 1013 aaKnown RBP8.74□□□□□ -1.01
UBR1-204ENST00000563239 PRR23BQ6ZRT6 265 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 RFX8Q6ZV50 586 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 CEP68Q76N32 757 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 POLNQ7Z5Q5 900 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.74□□□□□ -1.01
UBR1-204ENST00000563239 TMTC1Q8IUR5 882 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 ARHGAP12Q8IWW6 846 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 STK40Q8N2I9 435 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 NPWQ8N729 165 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 SPC24Q8NBT2 197 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 NETO2Q8NC67 525 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 TEKT4Q8WW24 435 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 SIPA1Q96FS4 1042 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 HMCESQ96FZ2 354 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 PPP1R9BQ96SB3 815 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 SPON2Q9BUD6 331 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 C2orf49Q9BVC5 232 aaPredicted RBP8.74□□□□□ -1.01
UBR1-204ENST00000563239 MAGEH1Q9H213 219 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 LRRC19Q9H756 370 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 ZWILCHQ9H900 591 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 PCDH18Q9HCL0 1135 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 ATP13A1Q9HD20 1204 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 ETNK2Q9NVF9 386 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 IMPACTQ9P2X3 320 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 SALL4Q9UJQ4 1053 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 CYP8B1Q9UNU6 501 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 PCDHA13Q9Y5I0 950 aa8.74□□□□□ -1.01
UBR1-204ENST00000563239 EPN1Q9Y6I3 576 aaPredicted RBP8.74□□□□□ -1.01
UBR1-204ENST00000563239 EP300Q09472 2414 aaPredicted RBP8.74□□□□□ -1.01
UBR1-204ENST00000563239 ATRXP46100 2492 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 C10orf142B7Z368 130 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 RASA4BC9J798 803 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 CBX4O00257 560 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 RIOK3O14730 519 aaKnown RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 FGF10O15520 208 aaPredicted RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 RASA4O43374 803 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 KDELR3O43731 214 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 RAMP2O60895 175 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 ZNF217O75362 1048 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 NDUFA10O95299 355 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 CD48P09326 243 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 DESP17661 470 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 AMPD1P23109 780 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 MAN1A1P33908 653 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 PTGER3P43115 390 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 SERPINH1P50454 418 aaKnown RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 METAP1P53582 386 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 HADHBP55084 474 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms