RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GRHL2Q6ISB3 625 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 TMEM88Q6PEY1 159 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 TMEM65Q6PI78 240 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 ANKS1BQ7Z6G8 1248 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 SUGP1Q8IWZ8 645 aaKnown RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 TERB1Q8NA31 727 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 CSGALNACT1Q8TDX6 532 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 NOC3LQ8WTT2 800 aaKnown RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 GLMPQ8WWB7 406 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 HIC2Q96JB3 615 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 PPM1MQ96MI6 270 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 UROC1Q96N76 676 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 LENG8Q96PV6 779 aaPredicted RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 FYTTD1Q96QD9 318 aaKnown RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 SNX18Q96RF0 628 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 MACROD1Q9BQ69 325 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 TRIM2Q9C040 744 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 WASH6PQ9NQA3 447 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 ARPP21Q9UBL0 812 aaPredicted RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 KCND3Q9UK17 655 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 ASAP1Q9ULH1 1129 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 VPS4AQ9UN37 437 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 COX11Q9Y6N1 276 aa4.13□□□□□ -1.75
HERC1-215ENST00000561436 USP42Q9H9J4 1324 aaKnown RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 CICQ96RK0 1608 aaPredicted RBP4.13□□□□□ -1.75
HERC1-215ENST00000561436 KDM6AO15550 1401 aaPredicted RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 LOC105369274A0A096LPK9 316 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 LOC102723532A0A0G2JNH3 316 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 B9A039 149 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 H0YIN7 160 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 ZNF213O14771 459 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 EPB41L2O43491 1005 aaKnown RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 EXOC3O60645 756 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 NHLRC4P0CG21 123 aaPredicted RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 CNTFP26441 200 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 RGS19P49795 217 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 RCAN1P53805 252 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 C21orf58P58505 322 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 GPC5P78333 572 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 MRPS21P82921 87 aaKnown RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 CFHR3Q02985 330 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 DEUP1Q05D60 604 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 PDCLQ13371 301 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 RRS1Q15050 365 aaKnown RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 SLC4A8Q2Y0W8 1093 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 CERKLQ49MI3 558 aaPredicted RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 NAPRTQ6XQN6 538 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 TRIM72Q6ZMU5 477 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 SYNE3Q6ZMZ3 975 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 DCDC5Q6ZRR9 648 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 HERC6Q8IVU3 1022 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 OR4N4Q8N0Y3 316 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 IL17REQ8NFR9 667 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 SLC2A12Q8TD20 617 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 NPIPB3Q92617 1050 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 AKAP1Q92667 903 aaKnown RBP eCLIP4.12□□□□□ -1.75
HERC1-215ENST00000561436 RILPL2Q969X0 211 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 CCDC17Q96LX7 622 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 MMS19Q96T76 1030 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 SEC62Q99442 399 aaKnown RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 THAP7Q9BT49 309 aaPredicted RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 MECRQ9BV79 373 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 TEX13AQ9BXU3 409 aaPredicted RBP4.12□□□□□ -1.75
HERC1-215ENST00000561436 CDCP1Q9H5V8 836 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 SAP30LQ9HAJ7 183 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 VPS45Q9NRW7 570 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 ABHD10Q9NUJ1 306 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 SERGEFQ9UGK8 458 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 RAB21Q9UL25 225 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 SLC12A4Q9UP95 1085 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 CRYL1Q9Y2S2 319 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 ENTPD2Q9Y5L3 495 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 KAT6AQ92794 2004 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 KDRP35968 1356 aa4.12□□□□□ -1.75
HERC1-215ENST00000561436 PIK3C2AO00443 1686 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.11□□□□□ -1.75
HERC1-215ENST00000561436 A0A1B0GVC2 190 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 BTBD19C9JJ37 291 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 H7C1Q1 480 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 HOXC11O43248 304 aaPredicted RBP4.11□□□□□ -1.75
HERC1-215ENST00000561436 ANP32CO43423 234 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 CCNT1O60563 726 aaKnown RBP4.11□□□□□ -1.75
HERC1-215ENST00000561436 RBMXL2O75526 392 aaKnown RBP4.11□□□□□ -1.75
HERC1-215ENST00000561436 RNF8O76064 485 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 JTBO76095 146 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 PDE8BO95263 885 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 MT-CO3P00414 261 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 POLBP06746 335 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 CYP3A4P08684 503 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 CNPP09543 421 aaKnown RBP4.11□□□□□ -1.75
HERC1-215ENST00000561436 IFIT1P09914 478 aaKnown RBP4.11□□□□□ -1.75
HERC1-215ENST00000561436 GPD1P21695 349 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 FPR3P25089 353 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 GALNSP34059 522 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 KRT9P35527 623 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 TAS2R50P59544 299 aa4.11□□□□□ -1.75
HERC1-215ENST00000561436 RPL15P61313 204 aaKnown RBP4.11□□□□□ -1.75
HERC1-215ENST00000561436 WDR5P61964 334 aaKnown RBP4.11□□□□□ -1.75
HERC1-215ENST00000561436 RAE1P78406 368 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms