RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RXFP2Q8WXD0 754 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 OR8D1Q8WZ84 308 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 CAMK1GQ96NX5 476 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 GAREM1Q9H706 876 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 ADAMTS1Q9UHI8 967 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 VPS51Q9UID3 782 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 COL5A1P20908 1838 aaPredicted RBP17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 A0A0D9SEW6 157 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 LRRC10BA6NIK2 292 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 LRRC72A6NJI9 287 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 C2CD4BA6NLJ0 364 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 DRGXA6NNA5 263 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 TOP3BO95985 862 aaKnown RBP17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 MT-CO1P00395 513 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 SRCP12931 536 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 SPINK2P20155 84 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 GLDCP23378 1020 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 DRD3P35462 400 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 VASPP50552 380 aaPredicted RBP17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 SIM1P81133 766 aaPredicted RBP17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 SFSWAPQ12872 951 aaKnown RBP17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 DLG2Q15700 870 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 HLA-BQ31612 363 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 CCDC14Q49A88 953 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 SETD3Q86TU7 594 aaPredicted RBP17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 NAXDQ8IW45 347 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 DCAF4L2Q8NA75 395 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 OR7D4Q8NG98 312 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 C1orf74Q96LT6 269 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 SLC6A18Q96N87 628 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 HAPLN3Q96S86 360 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 C2orf49Q9BVC5 232 aaPredicted RBP17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 NAT10Q9H0A0 1025 aaKnown RBP17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 ADAM22Q9P0K1 906 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 ZNF212Q9UDV6 495 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 SARDHQ9UL12 918 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 HS3ST2Q9Y278 367 aa17.64■□□□□ 0.41
CDC42BPB-208ENST00000561271 TEX33O43247 280 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 SH3BP5O60239 455 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 ENDOD1O94919 500 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 GOT1P17174 413 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 RRM1P23921 792 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 OR1E1P30953 314 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 GRIA4P48058 902 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 PPP2CBP62714 309 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 PPP2CAP67775 309 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 TEAD4Q15561 434 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 KIF19Q2TAC6 998 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 C6orf118Q5T5N4 469 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 LINGO4Q6UY18 593 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 MON1BQ7L1V2 547 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 DSG4Q86SJ6 1040 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 PHF13Q86YI8 300 aaPredicted RBP17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 OR2T34Q8NGX1 318 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 OR14C36Q8NHC7 312 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 TMEM51Q9NW97 253 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 SNX11Q9Y5W9 270 aa17.63■□□□□ 0.41
CDC42BPB-208ENST00000561271 K7ERQ8 282 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 PTPN9P43378 593 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 GSCP56915 257 aaPredicted RBP17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 KRT83P78385 493 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 SLC14A1Q13336 389 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 KCNT1Q5JUK3 1230 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 IL27RAQ6UWB1 636 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 ADAT2Q7Z6V5 191 aaKnown RBP17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 DRC7Q8IY82 874 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 CCDC185Q8N715 623 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 ATP11CQ8NB49 1132 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 C3orf20Q8ND61 904 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 PIP4K2CQ8TBX8 421 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 FAM172AQ8WUF8 416 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 AGPAT1Q99943 283 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 BPIFA3Q9BQP9 254 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 SELENOOQ9BVL4 669 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 ZYG11BQ9C0D3 744 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 EBF2Q9HAK2 575 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 OSGEPQ9NPF4 335 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 TM7SF3Q9NS93 570 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 ANKRD6Q9Y2G4 727 aa17.62■□□□□ 0.41
CDC42BPB-208ENST00000561271 A0A1W2PPC4 97 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 C1QTNF3-AMACRE9PGA6 284 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 ALOX15BO15296 676 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 SMAD6O43541 496 aaKnown RBP17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 RTN2O75298 545 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 CALB1P05937 261 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 KRT3P12035 628 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 GPD1P21695 349 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 RFC1P35251 1148 aaPredicted RBP17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 HDAC4P56524 1084 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 CNTN1Q12860 1018 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 ACBD5Q5T8D3 534 aaPredicted RBP17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 MANEALQ5VSG8 457 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 DNAJC24Q6P3W2 148 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 C22orf39Q6P5X5 142 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 STRADAQ7RTN6 431 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 SPON2Q9BUD6 331 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 MAGEB5Q9BZ81 275 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 ATP13A1Q9HD20 1204 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 WASF3Q9UPY6 502 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms