RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CRKLP46109 303 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 NAB2Q15742 525 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 CNKSR3Q6P9H4 555 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 ZCCHC12Q6PEW1 402 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 IZUMO2Q6UXV1 221 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 MEX3BQ6ZN04 569 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 LRRC49Q8IUZ0 686 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 SYNE4Q8N205 404 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 MAML1Q92585 1016 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 STMN2Q93045 179 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 PRICKLE1Q96MT3 831 aaPredicted RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 PPP1R10Q96QC0 940 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 TGS1Q96RS0 853 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 HGH1Q9BTY7 390 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 DDX47Q9H0S4 455 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 CNNM1Q9NRU3 951 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNHIT2Q9UHR6 403 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 KCND3Q9UK17 655 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 ANGPTL2Q9UKU9 493 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 TELO2Q9Y4R8 837 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 XDHP47989 1333 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 TMEM120BA0PK00 339 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 TRIM49BA6NDI0 452 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 FAM205CA6NFA0 338 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 BTBD18B2RXH4 712 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 GOLGA8TH3BQL2 631 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 HRO43593 1189 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 ADAM23O75077 832 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 SCG5P05408 212 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 GOLGA8HP0CJ92 632 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 CYP2C9P11712 490 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 ADORA1P30542 326 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 ADH7P40394 386 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 METAP2P50579 478 aaKnown RBP eCLIP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 CCR3P51677 355 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 CDR2Q01850 454 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 GFPT1Q06210 699 aaPredicted RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 CHRNDQ07001 517 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 STK4Q13043 487 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 SLC14A1Q13336 389 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 HNRNPDQ14103 355 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 GRIK5Q16478 980 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 IYDQ6PHW0 289 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 CYB5R4Q7L1T6 521 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 LPCAT2Q7L5N7 544 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 VGLL2Q8N8G2 317 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 TRPC4APQ8TEL6 797 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 ARHGEF2Q92974 986 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 SIPA1Q96FS4 1042 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 MAGEB18Q96M61 343 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 MIPEPQ99797 713 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 KLF16Q9BXK1 252 aaPredicted RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 PRDM14Q9GZV8 571 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 C2orf40Q9H1Z8 148 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 FOXP1Q9H334 677 aaPredicted RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 USP40Q9NVE5 1235 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 AMACRQ9UHK6 382 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 PACSIN2Q9UNF0 486 aaPredicted RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 STX8Q9UNK0 236 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 ANGEL1Q9UNK9 670 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 TMEM5Q9Y2B1 443 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 MROH5Q6ZUA9 1318 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 A0A087WZ62 844 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 ARPC4-TTLL3A0A0A6YYG9 625 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 SSU72P8A0A1W2PR75 194 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 INO80B-WBP1J3KQ70 363 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 K7EPI3 171 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 DDX39AO00148 427 aaKnown RBP6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 PGRMC1O00264 195 aaKnown RBP6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 RASGRF2O14827 1237 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 NKRFO15226 690 aaKnown RBP eCLIP6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 CAMTA2O94983 1202 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 PDE8BO95263 885 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 CBX6O95503 412 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 AHSGP02765 367 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 THBS1P07996 1170 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 CHMP24386 653 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 MAPK3P27361 379 aaPredicted RBP6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 GRK3P35626 688 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 PTPN5P54829 565 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 SLC12A3P55017 1021 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 ANTXR2P58335 489 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 DLG4P78352 724 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 DSC2Q02487 901 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 FOXO1Q12778 655 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 MSLNQ13421 630 aaPredicted RBP6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 SLC29A2Q14542 456 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 LPIN1Q14693 890 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 RPS6KA1Q15418 735 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 ADIPOQQ15848 244 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 HSP90AA5PQ58FG0 334 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 WDR44Q5JSH3 913 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 SUSD1Q6UWL2 747 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 RBM44Q6ZP01 1051 aaKnown RBP6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 SLC7A5P1Q8MH63 180 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 ADSSL1Q8N142 457 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 DTX3LQ8TDB6 740 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 STARD8Q92502 1023 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 COPS5Q92905 334 aa6.9□□□□□ -1.31
TSPAN3-209ENST00000560715 FAM120BQ96EK7 910 aaKnown RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms