RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 NCOR1O75376 2440 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PRRC2BQ5JSZ5 2229 aaKnown RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 TCRBV5S1A1TA0A578 114 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 FAM159BA6NKW6 160 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 HACD1B0YJ81 288 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PRR5-ARHGAP8B1AHC4 643 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PI4K2BG5E9Z4 385 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 APOL1O14791 398 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ZSCAN9O15535 394 aaPredicted RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 MAP3K13O43283 966 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 RNASEH1O60930 286 aaKnown RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 SIN3BO75182 1162 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 TRMUO75648 421 aaKnown RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 GJB5O95377 273 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ZBED1O96006 694 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 TNNC2P02585 160 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 CA3P07451 260 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ZSCAN5DPP0CG00 497 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 SRGAP2BP0DMP2 458 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 C7P10643 843 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF12P17014 697 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PSMC3P17980 439 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 SERPINB5P36952 375 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 GRM5P41594 1212 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 SLC1A6P48664 564 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ACOT2P49753 483 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 KPNA2P52292 529 aaKnown RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 DEFB103AP81534 67 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ARHGAP8P85298 464 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PDAP1Q13442 181 aaKnown RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 FRG1Q14331 258 aaKnown RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 LPIN1Q14693 890 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 KIZQ2M2Z5 673 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 FASTKD1Q53R41 847 aaKnown RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 FBXO47Q5MNV8 452 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PDPK2PQ6A1A2 396 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 FAM117BQ6P1L5 589 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 BNC2Q6ZN30 1099 aaPredicted RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 TMCO2Q7Z6W1 182 aaPredicted RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PRUNE1Q86TP1 453 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 KBTBD2Q8IY47 623 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 UNC5BQ8IZJ1 945 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PACRGLQ8N7B6 248 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 KYQ8NBH2 561 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ZSWIM2Q8NEG5 633 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 SGF29Q96ES7 293 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ANKRD36BP1Q96IX9 119 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 RAD9AQ99638 391 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 HERPUD2Q9BSE4 406 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 TRIM15Q9C019 465 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 EIF2B3Q9NR50 452 aaKnown RBP8.73□□□□□ -1.01
CCDC33-209ENST00000560565 CHST12Q9NRB3 414 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 TBC1D23Q9NUY8 699 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ARMCX1Q9P291 453 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ZNHIT2Q9UHR6 403 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 PPM1HQ9ULR3 514 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 POMPQ9Y244 141 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 GINS2Q9Y248 185 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 LZTS1Q9Y250 596 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 ATRXP46100 2492 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 TTC3P53804 2025 aa8.73□□□□□ -1.01
CCDC33-209ENST00000560565 BDP1A6H8Y1 2624 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 RGSL1A5PLK6 1076 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 C3orf70A6NLC5 250 aaPredicted RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 EIF4E1BA6NMX2 242 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 FOXO6A8MYZ6 492 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 GOLGA8SH3BPF8 625 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 GOLGA8MH3BSY2 632 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 H7C0C1 242 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 GOLGA8RI6L899 631 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 MATN2O00339 956 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 B4GALT5O43286 388 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 PRPSAP2O60256 369 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 TADA2AO75478 443 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 RFPL1O75677 317 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 UPP2O95045 317 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ASS1P00966 412 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 MPOP05164 745 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 C8BP07358 591 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 HNRNPCP07910 306 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 STAG3L1P0CL83 205 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 FOSL2P15408 326 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF23P17027 643 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 PMLP29590 882 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 CD52P31358 61 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 L1CAMP32004 1257 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ATP5OP48047 213 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 POLD2P49005 469 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 HARS2P49590 506 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 CDK9P50750 372 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ABCE1P61221 599 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 COG7P83436 770 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 PDE1BQ01064 536 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 SLC25A11Q02978 314 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 PPIDQ08752 370 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ADGRE1Q14246 886 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 SPATS1Q496A3 300 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF394Q53GI3 561 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 GRTP1Q5TC63 336 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms