RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 DRGXA6NNA5 263 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 LGALS16A8MUM7 142 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 TBC1D3LB9A6J9 549 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 E9PAM4 449 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 RNGTTO60942 597 aaKnown RBP14.44□□□□□ -0.1
TPM1-223ENST00000560445 GFPT2O94808 682 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 IGHV4-34P06331 123 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 MMEP08473 750 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 TBC1D3HP0C7X1 549 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 CDK4P11802 303 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 MMP8P22894 467 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 KIF19Q2TAC6 998 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 SETMARQ53H47 684 aaPredicted RBP14.44□□□□□ -0.1
TPM1-223ENST00000560445 TBC1D3GQ6DHY5 549 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 TBC1D3CQ6IPX1 549 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 NAPEPLDQ6IQ20 393 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 DPY19L2P1Q6NXN4 242 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 NEK5Q6P3R8 708 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 STRADAQ7RTN6 431 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 IQCHQ86VS3 1027 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 TBC1D3Q8IZP1 549 aaPredicted RBP14.44□□□□□ -0.1
TPM1-223ENST00000560445 GPT2Q8TD30 523 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 RHBDD1Q8TEB9 315 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 FRS2Q8WU20 508 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 CPA5Q8WXQ8 436 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 ADAMTS14Q8WXS8 1223 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 CEP44Q9C0F1 390 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 MTG2Q9H4K7 406 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 DONSONQ9NYP3 566 aa14.44□□□□□ -0.1
TPM1-223ENST00000560445 PPARGC1AQ9UBK2 798 aaKnown RBP14.44□□□□□ -0.1
TPM1-223ENST00000560445 LIMA1Q9UHB6 759 aaKnown RBP14.44□□□□□ -0.1
TPM1-223ENST00000560445 FNDC3AQ9Y2H6 1198 aaKnown RBP14.44□□□□□ -0.1
TPM1-223ENST00000560445 ADCY5O95622 1261 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 CYP1A1P04798 512 aaPredicted RBP14.43□□□□□ -0.1
TPM1-223ENST00000560445 FTH1P19P0C7X4 201 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 CD38P28907 300 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 FLT3P36888 993 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 CTSKP43235 329 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 PTPN9P43378 593 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 COPB1P53618 953 aaKnown RBP14.43□□□□□ -0.1
TPM1-223ENST00000560445 JAM2P57087 298 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 NRG1Q02297 640 aaPredicted RBP14.43□□□□□ -0.1
TPM1-223ENST00000560445 UBXN1Q04323 297 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.43□□□□□ -0.1
TPM1-223ENST00000560445 RAB44Q7Z6P3 723 aaPredicted RBP14.43□□□□□ -0.1
TPM1-223ENST00000560445 TRIM69Q86WT6 500 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 AADATQ8N5Z0 425 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 TMIEQ8NEW7 156 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 ALG14Q96F25 216 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 SERAC1Q96JX3 654 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 NLRC4Q9NPP4 1024 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 METTL5Q9NRN9 209 aaKnown RBP14.43□□□□□ -0.1
TPM1-223ENST00000560445 FANCLQ9NW38 375 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 TMEM59LQ9UK28 342 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 PPM1HQ9ULR3 514 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 HPCAL4Q9UM19 191 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 WASF3Q9UPY6 502 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 OR51B4Q9Y5P0 310 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 SNX11Q9Y5W9 270 aa14.43□□□□□ -0.1
TPM1-223ENST00000560445 TNFSF14O43557 240 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 LATO43561 262 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 PLRG1O43660 514 aaKnown RBP14.42□□□□□ -0.1
TPM1-223ENST00000560445 HYAL3O43820 417 aaPredicted RBP14.42□□□□□ -0.1
TPM1-223ENST00000560445 KRT3P12035 628 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 MAPKAPK2P49137 400 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 GSCP56915 257 aaPredicted RBP14.42□□□□□ -0.1
TPM1-223ENST00000560445 OTUD1Q5VV17 481 aaPredicted RBP14.42□□□□□ -0.1
TPM1-223ENST00000560445 DBX2Q6ZNG2 339 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 Q6ZVU0 165 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 GALNT15Q8N3T1 639 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 PCDH20Q8N6Y1 951 aaKnown RBP14.42□□□□□ -0.1
TPM1-223ENST00000560445 MFSD2AQ8NA29 543 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 KDF1Q8NAX2 398 aaPredicted RBP14.42□□□□□ -0.1
TPM1-223ENST00000560445 FAM174AQ8TBP5 190 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 PIP4K2CQ8TBX8 421 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 FAM131CQ96AQ9 280 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 CFAP57Q96MR6 1250 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 ERGIC2Q96RQ1 377 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 ELF4Q99607 663 aaPredicted RBP14.42□□□□□ -0.1
TPM1-223ENST00000560445 SELENOOQ9BVL4 669 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 ERVMER34-1Q9H9K5 563 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 ATP13A1Q9HD20 1204 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 ADAM22Q9P0K1 906 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 SERGEFQ9UGK8 458 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 VPS51Q9UID3 782 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 CABIN1Q9Y6J0 2220 aa14.42□□□□□ -0.1
TPM1-223ENST00000560445 KNL1Q8NG31 2342 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 USP24Q9UPU5 2620 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 KMT2BQ9UMN6 2715 aaPredicted RBP14.41□□□□□ -0.1
TPM1-223ENST00000560445 FAM221BA6H8Z2 402 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 ZSCAN5CA6NGD5 496 aaPredicted RBP14.41□□□□□ -0.1
TPM1-223ENST00000560445 SMTNL1A8MU46 457 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 PRAMEF26H0Y7S4 382 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 SRGAP2O75044 1071 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 CBFA2T3O75081 653 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 ENDOD1O94919 500 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 SRCP12931 536 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 FERP16591 822 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 DRD3P35462 400 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 AIF1P55008 147 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms