RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FAM182AQ5T1J6 154 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 TANGO2Q6ICL3 276 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 ZDHHC24Q6UX98 284 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 MFN1Q8IWA4 741 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 ZNF567Q8N184 647 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 BBOF1Q8ND07 529 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 OR7D4Q8NG98 312 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 WFDC5Q8TCV5 224 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.46□□□□□ -0.42
HERC1-205ENST00000559886 MAML1Q92585 1016 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 ART4Q93070 314 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 E2F7Q96AV8 911 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 ACE2Q9BYF1 805 aaPredicted RBP12.46□□□□□ -0.42
HERC1-205ENST00000559886 FAM129AQ9BZQ8 928 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 ZDHHC18Q9NUE0 388 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 DUS2Q9NX74 493 aaKnown RBP12.46□□□□□ -0.42
HERC1-205ENST00000559886 PLK2Q9NYY3 685 aa12.46□□□□□ -0.42
HERC1-205ENST00000559886 J3KR12 359 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 DNALI1O14645 258 aaPredicted RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 PEX11BO96011 259 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 GBP2P32456 591 aaPredicted RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 IL10RBQ08334 325 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 ZBTB17Q13105 803 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 HLTFQ14527 1009 aaKnown RBP eCLIP12.45□□□□□ -0.42
HERC1-205ENST00000559886 LY6G5CQ5SRR4 150 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 IZUMO3Q5VZ72 239 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 RNF219Q5W0B1 726 aaPredicted RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 FIBINQ8TAL6 211 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 MYLIPQ8WY64 445 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 ANKRD7Q92527 254 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 CDX2Q99626 313 aaPredicted RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 IL12RB2Q99665 862 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 CEP41Q9BYV8 373 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 MARK1Q9P0L2 795 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 TRHDEQ9UKU6 1024 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 USP15Q9Y4E8 981 aaPredicted RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 OR51B4Q9Y5P0 310 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 PRAMEF11O60813 436 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 JCHAINP01591 159 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 ITGA8P53708 1063 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 PLTPP55058 493 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 HNRNPDQ14103 355 aaKnown RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 ANO4Q32M45 955 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 EML3Q32P44 896 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 RHBDF2Q6PJF5 856 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 ARHGEF18Q6ZSZ5 1173 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 PCGF5Q86SE9 256 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 ZNF354CQ86Y25 554 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 CCDC117Q8IWD4 279 aaPredicted RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 GSPT2Q8IYD1 628 aaKnown RBP12.45□□□□□ -0.42
HERC1-205ENST00000559886 FBXO25Q8TCJ0 367 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 FEM1AQ9BSK4 669 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 BBS2Q9BXC9 721 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 NEUROG2Q9H2A3 272 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 SP110Q9HB58 689 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 ANAPC5Q9UJX4 755 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 CLEC4EQ9ULY5 219 aa12.45□□□□□ -0.42
HERC1-205ENST00000559886 NDC80O14777 642 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 KDELR3O43731 214 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 METTL18O95568 372 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 IFNAR2P48551 515 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 CAV1Q03135 178 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 RNASEH2BQ5TBB1 312 aaKnown RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 IL31Q6EBC2 164 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 HIBCHQ6NVY1 386 aaPredicted RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 VITQ6UXI7 678 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 Q7L0L9 218 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 PID1Q7Z2X4 250 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 MFSD6LQ8IWD5 586 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 CNTD1Q8N815 330 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 HNRNPLLQ8WVV9 542 aaKnown RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 CPT1BQ92523 772 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 ALG14Q96F25 216 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 TEKT5Q96M29 485 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 SPON2Q9BUD6 331 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 MUC3BQ9H195 1237 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 PDFQ9HBH1 243 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 ATP13A1Q9HD20 1204 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 RAB6BQ9NRW1 208 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 THG1LQ9NWX6 298 aaKnown RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 KLHL8Q9P2G9 620 aaPredicted RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 NEDD8-MDP1E9PL57 170 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 H3BQ06 376 aaPredicted RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 TYRP14679 529 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 MZF1P28698 734 aaPredicted RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 RENBPP51606 427 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 OXCT1P55809 520 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 FCHO2Q0JRZ9 810 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 MORF4L2Q15014 288 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 DHCR24Q15392 516 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 FBXO38Q6PIJ6 1188 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 AENQ8WTP8 325 aaKnown RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 ELSPBP1Q96BH3 223 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 ZNF419Q96HQ0 510 aaPredicted RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 LMLNQ96KR4 655 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 ZNF599Q96NL3 588 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 AGAP3Q96P47 875 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms