RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZNF585BQ52M93 769 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 WASHC2DQ5SRD0 308 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 MZT2BQ6NZ67 158 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 CFAP161Q6P656 301 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 CYP26C1Q6V0L0 522 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 IGFN1Q86VF2 1251 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 FAM185AQ8N0U4 392 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 C7orf57Q8NEG2 295 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 RSC1A1Q92681 617 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 KAT2AQ92830 837 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 INPP5DQ92835 1189 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 MIB2Q96AX9 1013 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D20Q96BZ9 403 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 ADAD1Q96M93 576 aaKnown RBP4.1□□□□□ -1.75
SPG11-218ENST00000559754 CTAGE1Q96RT6 745 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 EIF2AK1Q9BQI3 630 aaKnown RBP4.1□□□□□ -1.75
SPG11-218ENST00000559754 UNC45AQ9H3U1 944 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 MAP6D1Q9H9H5 199 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 RRN3Q9NYV6 651 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D14Q9P2M4 693 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 ZNF112Q9UJU3 913 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 CDC23Q9UJX2 597 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 TRPC5Q9UL62 973 aaPredicted RBP4.1□□□□□ -1.75
SPG11-218ENST00000559754 RABGAP1Q9Y3P9 1069 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 ITIH6Q6UXX5 1313 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 A0A0U1RQG5 324 aaPredicted RBP4.09□□□□□ -1.75
SPG11-218ENST00000559754 CXorf65A6NEN9 183 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 PRSS44E7EML9 344 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 DNPH1O43598 174 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 CSTBP04080 98 aaKnown RBP4.09□□□□□ -1.75
SPG11-218ENST00000559754 HOXC6P09630 235 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 KLRK1P26718 216 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 ENTPD1P49961 510 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 ROR2Q01974 943 aaKnown RBP4.09□□□□□ -1.75
SPG11-218ENST00000559754 SF3A3Q12874 501 aaKnown RBP eCLIP4.09□□□□□ -1.75
SPG11-218ENST00000559754 STARD3Q14849 445 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 ODF3L2Q3SX64 289 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 RINLQ6ZS11 566 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 MDGA2Q7Z553 956 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 KLBQ86Z14 1044 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 CAMK1DQ8IU85 385 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 SLC25A41Q8N5S1 370 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 ZNF527Q8NB42 609 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 TRAPPC12Q8WVT3 735 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 OIT3Q8WWZ8 545 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 C18orf8Q96DM3 657 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 ERP27Q96DN0 273 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 LTV1Q96GA3 475 aaPredicted RBP4.09□□□□□ -1.75
SPG11-218ENST00000559754 SLCO5A1Q9H2Y9 848 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 KRCC1Q9NPI7 259 aaPredicted RBP4.09□□□□□ -1.75
SPG11-218ENST00000559754 CLIC5Q9NZA1 410 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 IGSF9Q9P2J2 1179 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 MYO6Q9UM54 1294 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 PROCRQ9UNN8 238 aa4.09□□□□□ -1.75
SPG11-218ENST00000559754 COPG1Q9Y678 874 aaKnown RBP4.09□□□□□ -1.75
SPG11-218ENST00000559754 GOLGA6L3A6NEY3 463 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 MBD3L5A6NJ08 208 aaPredicted RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 PRSS47A8MTI9 375 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 KIF28PB7ZC32 967 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 ACOT8O14734 319 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 FFAR2O15552 330 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 CYP1A2P05177 515 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 DHRS4L1P0CG22 281 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 CPA1P15085 419 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 PTMSP20962 102 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 COPB2P35606 906 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 SLC16A2P36021 539 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 OAZ1P54368 228 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 ARL4CP56559 192 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 RNASELQ05823 741 aaKnown RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 TBRG1Q3YBR2 411 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 ENTPD8Q5MY95 495 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 ATPAF1Q5TC12 328 aaPredicted RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 RETSATQ6NUM9 610 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 C1orf122Q6ZSJ8 110 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 C18orf65Q6ZTR6 163 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 SPATA2LQ8IUW3 424 aaPredicted RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 SUGP1Q8IWZ8 645 aaKnown RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 SPATA3Q8NHX4 192 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 ELP5Q8TE02 316 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 HMGB4Q8WW32 186 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 USP13Q92995 863 aaPredicted RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 ZNF419Q96HQ0 510 aaPredicted RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 UBXN10Q96LJ8 280 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 IL21RQ9HBE5 538 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 PNRC2Q9NPJ4 139 aaKnown RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 LIN7CQ9NUP9 197 aaKnown RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 NCKIPSDQ9NZQ3 722 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 MAGED2Q9UNF1 606 aaPredicted RBP4.08□□□□□ -1.76
SPG11-218ENST00000559754 DTX4Q9Y2E6 619 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 SLC4A4Q9Y6R1 1079 aa4.08□□□□□ -1.76
SPG11-218ENST00000559754 OR6C75A6NL08 312 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 SLC38A8A6NNN8 435 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 EFCAB8A8MWE9 144 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 FIBPO43427 364 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 ASNA1O43681 348 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 SKAP2O75563 359 aaPredicted RBP4.07□□□□□ -1.76
SPG11-218ENST00000559754 MBD4O95243 580 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 PYGLP06737 847 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 ARSBP15848 533 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms