RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TTC39BQ5VTQ0 682 aaPredicted RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 HIBCHQ6NVY1 386 aaPredicted RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 RWDD4Q6NW29 188 aaKnown RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 NLRP14Q86W24 1093 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 HJURPQ8NCD3 748 aaPredicted RBP16.95■□□□□ 0.3
TPM1-219ENST00000559397 DDI1Q8WTU0 396 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 RTP4Q96DX8 246 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 C10orf88Q9H8K7 445 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 BRD9Q9H8M2 597 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 ETNK2Q9NVF9 386 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 GTSE1Q9NYZ3 720 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 ANAPC5Q9UJX4 755 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 TICRRQ7Z2Z1 1910 aa16.95■□□□□ 0.3
TPM1-219ENST00000559397 CFAP69A5D8W1 941 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 GOLGA6BA6NDN3 693 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 WASH4PA8MWX3 477 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 DCLK1O15075 740 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 HOXC11O43248 304 aaPredicted RBP16.94■□□□□ 0.3
TPM1-219ENST00000559397 TBL1XO60907 577 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 CYBBP04839 570 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 RHOQP17081 205 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 TDGQ13569 410 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 PAFAH1B3Q15102 231 aaKnown RBP16.94■□□□□ 0.3
TPM1-219ENST00000559397 P3H1Q32P28 736 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 IZUMO3Q5VZ72 239 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 DARS2Q6PI48 645 aaKnown RBP16.94■□□□□ 0.3
TPM1-219ENST00000559397 BHMTQ93088 406 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 OLFM3Q96PB7 478 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 BBS2Q9BXC9 721 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 TRPV5Q9NQA5 729 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 PLK2Q9NYY3 685 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 DTLQ9NZJ0 730 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 HEY1Q9Y5J3 304 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 A0A1B0GVM2 712 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 TCAF2A6NFQ2 919 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 NEDD8-MDP1E9PL57 170 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 H7C0C1 242 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 NDC80O14777 642 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 FGF10O15520 208 aaPredicted RBP16.94■□□□□ 0.3
TPM1-219ENST00000559397 NARSO43776 548 aaKnown RBP16.94■□□□□ 0.3
TPM1-219ENST00000559397 RRP9O43818 475 aaKnown RBP16.94■□□□□ 0.3
TPM1-219ENST00000559397 ADH1CP00326 375 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 IFNB1P01574 187 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 ADH5P11766 374 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 TYRP14679 529 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 ERCC2P18074 760 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 RPL22P35268 128 aaKnown RBP16.94■□□□□ 0.3
TPM1-219ENST00000559397 ATP5OP48047 213 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 CDH4P55283 916 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 GAD2Q05329 585 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 GPS1Q13098 491 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 GPS2Q13227 327 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 ANO4Q32M45 955 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 CFAP58Q5T655 872 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 CHST9Q7L1S5 443 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 ZC3H18Q86VM9 953 aaKnown RBP16.94■□□□□ 0.3
TPM1-219ENST00000559397 CPA6Q8N4T0 437 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 FAM71DQ8N9W8 422 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 FOXP3Q9BZS1 431 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 RETREG1Q9H6L5 497 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 CATSPERBQ9H7T0 1116 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 NDFIP2Q9NV92 336 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 TMEM248Q9NWD8 314 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 CLEC4EQ9ULY5 219 aa16.94■□□□□ 0.3
TPM1-219ENST00000559397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.93■□□□□ 0.3
TPM1-219ENST00000559397 TYW5A2RUC4 315 aaKnown RBP16.93■□□□□ 0.3
TPM1-219ENST00000559397 CLDN11O75508 207 aa16.93■□□□□ 0.3
TPM1-219ENST00000559397 SLMAPQ14BN4 828 aa16.93■□□□□ 0.3
TPM1-219ENST00000559397 BZW1Q7L1Q6 419 aaKnown RBP16.93■□□□□ 0.3
TPM1-219ENST00000559397 RTL3Q8N8U3 475 aaKnown RBP16.93■□□□□ 0.3
TPM1-219ENST00000559397 CHFRQ96EP1 664 aa16.93■□□□□ 0.3
TPM1-219ENST00000559397 ZIM3Q96PE6 472 aa16.93■□□□□ 0.3
TPM1-219ENST00000559397 EPB41L4BQ9H329 900 aa16.93■□□□□ 0.3
TPM1-219ENST00000559397 MED4Q9NPJ6 270 aa16.93■□□□□ 0.3
TPM1-219ENST00000559397 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
TPM1-219ENST00000559397 MFHAS1Q9Y4C4 1052 aa16.93■□□□□ 0.3
TPM1-219ENST00000559397 H3BQF6 201 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 LUC7L3O95232 432 aaKnown RBP16.92■□□□□ 0.3
TPM1-219ENST00000559397 SYF2O95926 243 aaKnown RBP16.92■□□□□ 0.3
TPM1-219ENST00000559397 GJA4P35212 333 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 NR1H3Q13133 447 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 MORF4L2Q15014 288 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 ITPRIPL2Q3MIP1 535 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 SLC45A4Q5BKX6 768 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 RNASEH2BQ5TBB1 312 aaKnown RBP16.92■□□□□ 0.3
TPM1-219ENST00000559397 TFAP2DQ7Z6R9 452 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 CDKL3Q8IVW4 592 aaPredicted RBP16.92■□□□□ 0.3
TPM1-219ENST00000559397 TTC8Q8TAM2 541 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 WFDC5Q8TCV5 224 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 DNASE1L2Q92874 299 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 QKIQ96PU8 341 aaKnown RBP eCLIP16.92■□□□□ 0.31e-8■■■■■ 42
TPM1-219ENST00000559397 SH3GL2Q99962 352 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 KLC2Q9H0B6 622 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 SLC2A4RGQ9NR83 387 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 FBXO10Q9UK96 956 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 ATP8A1Q9Y2Q0 1164 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
TPM1-219ENST00000559397 NFS1Q9Y697 457 aa16.92■□□□□ 0.3
TPM1-219ENST00000559397 HACD1B0YJ81 288 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms