RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 NUMA1Q14980 2115 aa12.23□□□□□ -0.45
HERC1-202ENST00000558324 CNOT1A5YKK6 2376 aaKnown RBP12.22□□□□□ -0.45
HERC1-202ENST00000558324 DRGXA6NNA5 263 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 RTN2O75298 545 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 UNGP13051 313 aaPredicted RBP12.22□□□□□ -0.45
HERC1-202ENST00000558324 GLDCP23378 1020 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 RRM1P23921 792 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 DRD3P35462 400 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 PPP2CBP62714 309 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 PPP2CAP67775 309 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 IL9RQ01113 521 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 CLEC16AQ2KHT3 1053 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 CCDC14Q49A88 953 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 KCNT1Q5JUK3 1230 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 C6orf118Q5T5N4 469 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 CAVIN1Q6NZI2 390 aaKnown RBP12.22□□□□□ -0.45
HERC1-202ENST00000558324 BNIPLQ7Z465 357 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 SETD3Q86TU7 594 aaPredicted RBP12.22□□□□□ -0.45
HERC1-202ENST00000558324 DRC7Q8IY82 874 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 DCAF4L2Q8NA75 395 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 PIP4K2CQ8TBX8 421 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 C1orf74Q96LT6 269 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 ERGIC2Q96RQ1 377 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 HAPLN3Q96S86 360 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 SPON2Q9BUD6 331 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 SCNM1Q9BWG6 230 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 ZYG11BQ9C0D3 744 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 NAT10Q9H0A0 1025 aaKnown RBP12.22□□□□□ -0.45
HERC1-202ENST00000558324 TNKS2Q9H2K2 1166 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 EBF2Q9HAK2 575 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 AASDHPPTQ9NRN7 309 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 ADAM22Q9P0K1 906 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 DAAM1Q9Y4D1 1078 aa12.22□□□□□ -0.45
HERC1-202ENST00000558324 ASCC3Q8N3C0 2202 aaKnown RBP12.22□□□□□ -0.45
HERC1-202ENST00000558324 IGLV3-10A0A075B6K4 115 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3DA0A087WVF3 549 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3IA0A087WXS9 549 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3EA0A087X179 549 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3KA0A087X1G2 549 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 A0A1W2PPC4 97 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3FA6NER0 549 aaPredicted RBP12.21□□□□□ -0.45
HERC1-202ENST00000558324 C2CD4BA6NLJ0 364 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 C1QTNF9BB2RNN3 333 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3LB9A6J9 549 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 C1QTNF3-AMACRE9PGA6 284 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 CBX4O00257 560 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 ENDOD1O94919 500 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3HP0C7X1 549 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 C1QTNF9P0C862 333 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 MAT2AP31153 395 aaKnown RBP12.21□□□□□ -0.45
HERC1-202ENST00000558324 C21orf59P57076 290 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 RACK1P63244 317 aaKnown RBP12.21□□□□□ -0.45
HERC1-202ENST00000558324 CNTN1Q12860 1018 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 PTP4A2Q12974 167 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TRIP6Q15654 476 aaKnown RBP12.21□□□□□ -0.45
HERC1-202ENST00000558324 FAM46CQ5VWP2 391 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3GQ6DHY5 549 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3CQ6IPX1 549 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 RWDD4Q6NW29 188 aaKnown RBP12.21□□□□□ -0.45
HERC1-202ENST00000558324 ARCQ7LC44 396 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 TBC1D3Q8IZP1 549 aaPredicted RBP12.21□□□□□ -0.45
HERC1-202ENST00000558324 GRIN3AQ8TCU5 1115 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 FAM172AQ8WUF8 416 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 AGPAT1Q99943 283 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 SELENOOQ9BVL4 669 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 ACE2Q9BYF1 805 aaPredicted RBP12.21□□□□□ -0.45
HERC1-202ENST00000558324 ATP13A1Q9HD20 1204 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 OSGEPQ9NPF4 335 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 KLK13Q9UKR3 277 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 WASF3Q9UPY6 502 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 HS3ST2Q9Y278 367 aa12.21□□□□□ -0.45
HERC1-202ENST00000558324 LRRC10BA6NIK2 292 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 H0Y8X5 98 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 KPNA3O00505 521 aaPredicted RBP12.2□□□□□ -0.46
HERC1-202ENST00000558324 WNT9AO14904 365 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 MCF2LO15068 1137 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 TEX33O43247 280 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 SMAD6O43541 496 aaKnown RBP12.2□□□□□ -0.46
HERC1-202ENST00000558324 CALB1P05937 261 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 ZNF883P0CG24 379 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 KRT3P12035 628 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 GPD1P21695 349 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 RFC1P35251 1148 aaPredicted RBP12.2□□□□□ -0.46
HERC1-202ENST00000558324 ADRA1BP35368 520 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
HERC1-202ENST00000558324 HDAC4P56524 1084 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 HNRNPDQ14103 355 aaKnown RBP12.2□□□□□ -0.46
HERC1-202ENST00000558324 ARL13BQ3SXY8 428 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 PRAMEF14Q5SWL7 426 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 ARTNQ5T4W7 220 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 ACBD5Q5T8D3 534 aaPredicted RBP12.2□□□□□ -0.46
HERC1-202ENST00000558324 AGBL4Q5VU57 503 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 C22orf39Q6P5X5 142 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 PHF13Q86YI8 300 aaPredicted RBP12.2□□□□□ -0.46
HERC1-202ENST00000558324 CHCHD4Q8N4Q1 142 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 CCDC185Q8N715 623 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 PNPLA1Q8N8W4 532 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 CHST14Q8NCH0 376 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 RHBDD1Q8TEB9 315 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms