RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 MAPK10P53779 464 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 NCKAP1LP55160 1127 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 ZNF445P59923 1031 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 EHHADHQ08426 723 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 DEFB109BQ30KR1 87 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 HNRNPA1L2Q32P51 320 aaKnown RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 POM121L1PQ3SYA9 428 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 C10orf120Q5SQS8 335 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 PERM1Q5SV97 790 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 KRT79Q5XKE5 535 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 CEP135Q66GS9 1140 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 NUGGCQ68CJ6 796 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 MBLAC2Q68D91 279 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 TMEM214Q6NUQ4 689 aaKnown RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 LIMS2Q7Z4I7 341 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 TRIM69Q86WT6 500 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 CPXM2Q8N436 756 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 ZNF557Q8N988 423 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 KDM1BQ8NB78 822 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 PDCD6IPQ8WUM4 868 aaKnown RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 KBTBD7Q8WVZ9 684 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 SCG3Q8WXD2 468 aaKnown RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 JPH3Q8WXH2 748 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 KIAA1143Q96AT1 154 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 HDAC11Q96DB2 347 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 ZNF274Q96GC6 653 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 HPDLQ96IR7 371 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 SLC45A3Q96JT2 553 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 JAKMIP1Q96N16 626 aaKnown RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 CDK5RAP1Q96SZ6 601 aaKnown RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 KCNK16Q96T55 309 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 MED10Q9BTT4 135 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 ZNF518BQ9C0D4 1074 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 DMAP1Q9NPF5 467 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 ABCB8Q9NUT2 735 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 FOXJ2Q9P0K8 574 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 IPO11Q9UI26 975 aaKnown RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 GGT7Q9UJ14 662 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 ERRFI1Q9UJM3 462 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 GGA2Q9UJY4 613 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 CLEC4EQ9ULY5 219 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 KIAA1549LQ6ZVL6 1849 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 C9orf172C9J069 976 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 D6RAR5 112 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 NKX2-8O15522 239 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 SIN3BO75182 1162 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 IGHDP01880 384 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 KLKB1P03952 638 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 CSF2P04141 144 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 ASLP04424 464 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 TMEM191BP0C7N4 346 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 RALAP11233 206 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 PABPC1P11940 636 aaKnown RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 DRD2P14416 443 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 LIFP15018 202 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 CPA1P15085 419 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 ITIH1P19827 911 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 RPS6KB1P23443 525 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 HLA-FP30511 346 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 CORO1AP31146 461 aaKnown RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 RECQLP46063 649 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 CACNA2D1P54289 1103 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 PPP2CBP62714 309 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 PPP2CAP67775 309 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 RAD51AP2Q09MP3 1159 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 CCDC15Q0P6D6 951 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 ORC2Q13416 577 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 DEFB133Q30KQ1 61 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 C9orf64Q5T6V5 341 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 FAM46CQ5VWP2 391 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 RIPOR1Q6ZS17 1223 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 KIAA0907Q7Z7F0 614 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 B3GNT8Q7Z7M8 397 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 ADIPOR2Q86V24 386 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 SLC9A9Q8IVB4 645 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 CACNA2D3Q8IZS8 1091 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 ZNF276Q8N554 614 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 TMEM145Q8NBT3 493 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 ZNF548Q8NEK5 533 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 OR6C4Q8NGE1 309 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 SNX29Q8TEQ0 813 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 BTN2A2Q8WVV5 523 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 PTPRN2Q92932 1015 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 TMA16Q96EY4 203 aaKnown RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 TCTN2Q96GX1 697 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 LURAP1Q96LR2 239 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 CGRRF1Q99675 332 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 B3GNT5Q9BYG0 378 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 FOXP3Q9BZS1 431 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 TSPAN10Q9H1Z9 355 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 SPASTQ9UBP0 616 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 AGO1Q9UL18 857 aaKnown RBP5.95□□□□□ -1.46
ATXN3-245ENST00000556958 KCTD3Q9Y597 815 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 STYXL1Q9Y6J8 313 aa5.95□□□□□ -1.46
ATXN3-245ENST00000556958 EDDM13A0A1B0GTR0 161 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 A8MXQ7 604 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 TCP11X1B4DZS4 312 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 K7ENM7 598 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms