RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NOP9Q86U38 636 aaKnown RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 DHX40Q8IX18 779 aaKnown RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 WFDC5Q8TCV5 224 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 PGAP3Q96FM1 320 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 RPL10LQ96L21 214 aaKnown RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 C1orf74Q96LT6 269 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 CCDC114Q96M63 670 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 HS3ST6Q96QI5 342 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 C2orf49Q9BVC5 232 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 TGIF2Q9GZN2 237 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 RSPH9Q9H1X1 276 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 CAPN10Q9HC96 672 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 SEPT11Q9NVA2 429 aaKnown RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 AJAP1Q9UKB5 411 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 ANGPTL2Q9UKU9 493 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 TPX2Q9ULW0 747 aaKnown RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 FCF1Q9Y324 198 aaKnown RBP7.54□□□□□ -1.2
SCFD1-222ENST00000556768 MAP4K5Q9Y4K4 846 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 HS3ST4Q9Y661 456 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 MYH10P35580 1976 aa7.54□□□□□ -1.2
SCFD1-222ENST00000556768 CNOT1A5YKK6 2376 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 LGALS16A8MUM7 142 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 SRGAP2O75044 1071 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 SIN3BO75182 1162 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 RNASEH2AO75792 299 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 IL1BP01584 269 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 SDC4P31431 198 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 SLC8A1P32418 973 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 CXCR3P49682 368 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 RPS14P62263 151 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 TPM4P67936 248 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 PITX1P78337 314 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 SUZ12Q15022 739 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 CST6Q15828 149 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 XYLT1Q86Y38 959 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 MMAAQ8IVH4 418 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 MINDY1Q8N5J2 469 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 NT5C3BQ969T7 300 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 HAPLN3Q96S86 360 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 NPY6RQ99463 290 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 PRMT1Q99873 361 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 FEM1AQ9BSK4 669 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 PIGVQ9NUD9 493 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 LIMA1Q9UHB6 759 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 EIF2B4Q9UI10 523 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 SLCO3A1Q9UIG8 710 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 INTS6Q9UL03 887 aaKnown RBP7.53□□□□□ -1.2
SCFD1-222ENST00000556768 ASPMQ8IZT6 3477 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 CEP295Q9C0D2 2601 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 GON4LQ3T8J9 2241 aa7.53□□□□□ -1.2
SCFD1-222ENST00000556768 TTC34A8MYJ7 566 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 FSBPO95073 299 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 CER1O95813 267 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 CALB1P05937 261 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 RHOCP08134 193 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 KRT3P12035 628 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 C5AR1P21730 350 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 MMP8P22894 467 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 OR1E1P30953 314 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 ACSL1P33121 698 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 RECQLP46063 649 aaPredicted RBP7.52□□□□□ -1.2
SCFD1-222ENST00000556768 PLK1P53350 603 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 NOMO3P69849 1222 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 TYRO3Q06418 890 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 C9orf64Q5T6V5 341 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 N4BP2L1Q5TBK1 243 aaPredicted RBP7.52□□□□□ -1.2
SCFD1-222ENST00000556768 PPP1R2P3Q6NXS1 205 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 SETD3Q86TU7 594 aaPredicted RBP7.52□□□□□ -1.2
SCFD1-222ENST00000556768 CIR1Q86X95 450 aaPredicted RBP7.52□□□□□ -1.2
SCFD1-222ENST00000556768 APCDD1Q8J025 514 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 ZCCHC9Q8N567 271 aaKnown RBP7.52□□□□□ -1.2
SCFD1-222ENST00000556768 ATP11CQ8NB49 1132 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 OR8D1Q8WZ84 308 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 LMLNQ96KR4 655 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 PABPC3Q9H361 631 aaKnown RBP7.52□□□□□ -1.2
SCFD1-222ENST00000556768 ETNK1Q9HBU6 452 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 CD93Q9NPY3 652 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 ARHGEF38Q9NXL2 777 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 ADAM22Q9P0K1 906 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 FZD4Q9ULV1 537 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 TBC1D30Q9Y2I9 924 aa7.52□□□□□ -1.2
SCFD1-222ENST00000556768 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.52□□□□□ -1.2
SCFD1-222ENST00000556768 HELZP42694 1942 aaKnown RBP7.52□□□□□ -1.2
SCFD1-222ENST00000556768 TPRP12270 2363 aaKnown RBP7.52□□□□□ -1.21
SCFD1-222ENST00000556768 UPK3BL1B0FP48 263 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 UPK3BL2E5RIL1 263 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 C1QTNF3-AMACRE9PGA6 284 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 MID1O15344 667 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 BNIP3LO60238 219 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 ADCY5O95622 1261 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 GOT1P17174 413 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 CD27P26842 260 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 MZF1P28698 734 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-222ENST00000556768 ETFBP38117 255 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 CTSOP43234 321 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-222ENST00000556768 C21orf59P57076 290 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 ATP11AP98196 1134 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 CENPCQ03188 943 aa7.52□□□□□ -1.21
SCFD1-222ENST00000556768 SLC20A2Q08357 652 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms