RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 SLC31A1O15431 190 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 FFAR2O15552 330 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 ZNF202O95125 648 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 TRUB2O95900 331 aaKnown RBP12.22□□□□□ -0.45
ACTN1-221ENST00000556571 SLC2A3P11169 496 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 PRCPP42785 496 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 GPD2P43304 727 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 FMO5P49326 533 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 NUMBP49757 651 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 DUSP3P51452 185 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-221ENST00000556571 KRT85P78386 507 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 CETN1Q12798 172 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 DLG2Q15700 870 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 POM121L1PQ3SYA9 428 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 COBLL1Q53SF7 1204 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 ANKRD40Q6AI12 368 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 CXorf57Q6NSI4 855 aaKnown RBP12.22□□□□□ -0.45
ACTN1-221ENST00000556571 STK32AQ8WU08 396 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 KCNE4Q8WWG9 221 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 IFT43Q96FT9 208 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 MED15Q96RN5 788 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
ACTN1-221ENST00000556571 ABCG4Q9H172 646 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 USP29Q9HBJ7 922 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 POPDC2Q9HBU9 364 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 METTL14Q9HCE5 456 aaKnown RBP12.22□□□□□ -0.45
ACTN1-221ENST00000556571 CPNE5Q9HCH3 593 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 RMND1Q9NWS8 449 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 PIEZO2Q9H5I5 2752 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 A0A1W2PQ27 194 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 A0A1W2PQ64 194 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 A0A1W2PQU0 124 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 B8ZZF3 427 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 KLK10O43240 276 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 CSO75390 466 aaKnown RBP12.21□□□□□ -0.45
ACTN1-221ENST00000556571 PIAS2O75928 621 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 IGLV3-25P01717 112 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 GIMD1P0DJR0 217 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 C6P13671 934 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 AKT2P31751 481 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 TAS2R38P59533 333 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 YWHAZP63104 245 aaKnown RBP12.21□□□□□ -0.45
ACTN1-221ENST00000556571 LRRC63Q05C16 580 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 VAC14Q08AM6 782 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 EIF4EBP2Q13542 120 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-221ENST00000556571 Q6ZVU0 165 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 CIR1Q86X95 450 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-221ENST00000556571 FAM181AQ8N9Y4 354 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 FAM174AQ8TBP5 190 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 SNRNP27Q8WVK2 155 aaKnown RBP12.21□□□□□ -0.45
ACTN1-221ENST00000556571 KAT5Q92993 513 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 RNF34Q969K3 372 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 ALG14Q96F25 216 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 APOLD1Q96LR9 279 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 FEM1AQ9BSK4 669 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 DUSP23Q9BVJ7 150 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 SLC4A5Q9BY07 1137 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 THSD1Q9NS62 852 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 NLGN3Q9NZ94 848 aa12.21□□□□□ -0.45
ACTN1-221ENST00000556571 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-221ENST00000556571 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-221ENST00000556571 SCAMP1O15126 338 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 CALCAP01258 141 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 PRLRP16471 622 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 HNRNPA2B1P22626 353 aaKnown RBP12.2□□□□□ -0.46
ACTN1-221ENST00000556571 CCR1P32246 355 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 PMS1P54277 932 aaKnown RBP12.2□□□□□ -0.46
ACTN1-221ENST00000556571 CDK17Q00537 523 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 GCNT1Q02742 428 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 MTA1Q13330 715 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 ZNF177Q13360 481 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-221ENST00000556571 MEA1Q16626 185 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 ZNF284Q2VY69 593 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 PIP5KL1Q5T9C9 394 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 ZNF658Q5TYW1 1059 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-221ENST00000556571 FBXL22Q6P050 247 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 IGF2-ASQ6U949 168 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 TMEM110Q86TL2 294 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 HORMAD1Q86X24 394 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 DCP2Q8IU60 420 aaKnown RBP12.2□□□□□ -0.46
ACTN1-221ENST00000556571 SH2D3CQ8N5H7 860 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 OR13H1Q8NG92 308 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 LMO3Q8TAP4 145 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 TTC9Q92623 222 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 KLK6Q92876 244 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 GRAMD1AQ96CP6 724 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 VCPIP1Q96JH7 1222 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 RPRD1AQ96P16 312 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-221ENST00000556571 MYOCQ99972 504 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 CALN1Q9BXU9 219 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 OSBPL2Q9H1P3 480 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 GOLPH3LQ9H4A5 285 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 ASCL3Q9NQ33 180 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 VPS28Q9UK41 221 aa12.2□□□□□ -0.46
ACTN1-221ENST00000556571 K7ESM1 405 aa12.19□□□□□ -0.46
ACTN1-221ENST00000556571 KPNA3O00505 521 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-221ENST00000556571 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
ACTN1-221ENST00000556571 P4HA2O15460 535 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms