RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 MASTLQ96GX5 879 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 RBM17Q96I25 401 aaKnown RBP4.99□□□□□ -1.61
SCFD1-221ENST00000556534 COG8Q96MW5 612 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-221ENST00000556534 PNRC2Q9NPJ4 139 aaKnown RBP4.99□□□□□ -1.61
SCFD1-221ENST00000556534 RNF146Q9NTX7 359 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 POT1Q9NUX5 634 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 LUZP4Q9P127 313 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 HDAC6Q9UBN7 1215 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 CACNA1IQ9P0X4 2223 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 DDAH2O95865 285 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 IFNA2P01563 188 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 HLA-DQA2P01906 255 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 KLRC2P26717 231 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 BYSLQ13895 437 aaKnown RBP4.98□□□□□ -1.61
SCFD1-221ENST00000556534 CBWD5Q5RIA9 395 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 AAGABQ6PD74 315 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 COLCA1Q6ZS62 124 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 TECPR1Q7Z6L1 1165 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 SCAIQ8N9R8 606 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 CENPIQ92674 756 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-221ENST00000556534 SLC25A28Q96A46 364 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 NLRP4Q96MN2 994 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 PPP1R10Q96QC0 940 aaKnown RBP4.98□□□□□ -1.61
SCFD1-221ENST00000556534 PSMD1Q99460 953 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 CADM1Q9BY67 442 aaKnown RBP4.98□□□□□ -1.61
SCFD1-221ENST00000556534 HIPK3Q9H422 1215 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 CD207Q9UJ71 328 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 OSGIN2Q9Y236 505 aa4.98□□□□□ -1.61
SCFD1-221ENST00000556534 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-221ENST00000556534 TMEM247A6NEH6 219 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 BMP15O95972 392 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 FCGR2AP12318 317 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 TNNT1P13805 278 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 PRKCHP24723 683 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 SLC16A2P36021 539 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 MTNR1AP48039 350 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 KRTAP10-11P60412 298 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 MANEAQ5SRI9 462 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 AWAT2Q6E213 333 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 AADACL2Q6P093 401 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 DENND1BQ6P3S1 775 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 TRAPPC11Q7Z392 1133 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 IGFN1Q86VF2 1251 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 ANKRD18AQ8IVF6 992 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 SMC5Q8IY18 1101 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 KDM1BQ8NB78 822 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 CMASQ8NFW8 434 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-221ENST00000556534 HDAC7Q8WUI4 952 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 TRIM63Q969Q1 353 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 RNFT2Q96EX2 444 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 CTDSP1Q9GZU7 261 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 TASP1Q9H6P5 420 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 ZDHHC7Q9NXF8 308 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 ANAPC4Q9UJX5 808 aa4.97□□□□□ -1.61
SCFD1-221ENST00000556534 VWA3AA6NCI4 1184 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 B4DGG1 531 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 EIF3FO00303 357 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-221ENST00000556534 DHX16O60231 1041 aaKnown RBP4.96□□□□□ -1.62
SCFD1-221ENST00000556534 ZC3H11AO75152 810 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCFD1-221ENST00000556534 CKMT1AP12532 417 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 HSD3B1P14060 373 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 TNFSF8P32971 234 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 GJC1P36383 396 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 LINC00205P59089 165 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 ARHGAP8P85298 464 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 HNRNPA0Q13151 305 aaKnown RBP4.96□□□□□ -1.62
SCFD1-221ENST00000556534 IL13RA2Q14627 380 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 PTGR1Q14914 329 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 AP5B1Q2VPB7 878 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 PRTGQ2VWP7 1150 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 ZNF260Q3ZCT1 412 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 MAP3K21Q5TCX8 1036 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 TBC1D9BQ66K14 1250 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 GJB7Q6PEY0 223 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 PIM3Q86V86 326 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 CPOQ8IVL8 374 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 ANKRD44Q8N8A2 993 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 MYRIPQ8NFW9 859 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 TMEM174Q8WUU8 243 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 FAR1Q8WVX9 515 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 HERVK_113Q902F9 699 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 INPP5DQ92835 1189 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 ZSCAN31Q96LW9 406 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-221ENST00000556534 SCLT1Q96NL6 688 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 FAM234AQ9H0X4 552 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 NOD2Q9HC29 1040 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 FZD3Q9NPG1 666 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 SAGE1Q9NXZ1 904 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 ICKQ9UPZ9 632 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 GDAQ9Y2T3 454 aa4.96□□□□□ -1.62
SCFD1-221ENST00000556534 GAGE12JA6NER3 117 aa4.95□□□□□ -1.62
SCFD1-221ENST00000556534 H3BNX3 289 aa4.95□□□□□ -1.62
SCFD1-221ENST00000556534 UNGP13051 313 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-221ENST00000556534 HOXB2P14652 356 aa4.95□□□□□ -1.62
SCFD1-221ENST00000556534 TBXAS1P24557 533 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-221ENST00000556534 POLD2P49005 469 aa4.95□□□□□ -1.62
SCFD1-221ENST00000556534 CCT4P50991 539 aaKnown RBP4.95□□□□□ -1.62
SCFD1-221ENST00000556534 SLC12A1Q13621 1099 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms