RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SETD4Q9NVD3 440 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 TBC1D13Q9NVG8 400 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 XPR1Q9UBH6 696 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 POMPQ9Y244 141 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 PKP3Q9Y446 797 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 SLC30A1Q9Y6M5 507 aa15.27■□□□□ 0.04
ARHGEF40-207ENST00000556399 A0A087X1B8 175 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 TYROBPO43914 113 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 DNAJB2P25686 324 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 ZRANB3Q5FWF4 1079 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 SLC27A1Q6PCB7 646 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 UNC93AQ86WB7 457 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 FBXL18Q96ME1 805 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 LENG8Q96PV6 779 aaPredicted RBP15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 EPB41L4BQ9H329 900 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 PNPLA3Q9NST1 481 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 DDX43Q9NXZ2 648 aaKnown RBP15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 CILPO75339 1184 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 C2P06681 752 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 PTPRAP18433 802 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 IL1R2P27930 398 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 IDH3AP50213 366 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 NEK3P51956 506 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 SQLEQ14534 574 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 SIX1Q15475 284 aaPredicted RBP15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 SPATA6LQ8N4H0 392 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 NIPA2Q8N8Q9 360 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 GLMNQ92990 594 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 NSMCE2Q96MF7 247 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 SPATA16Q9BXB7 569 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 ACSS2Q9NR19 701 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 LATS2Q9NRM7 1088 aa15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 TRMT6Q9UJA5 497 aaKnown RBP15.27■□□□□ 0.03
ARHGEF40-207ENST00000556399 CPB1P15086 417 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 ATP5F1P24539 256 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 NUMBP49757 651 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 TRAF2Q12933 501 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 C6orf52Q5T4I8 152 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 RDH11Q8TC12 318 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 BTBD9Q96Q07 612 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 TRIM54Q9BYV2 358 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 PTPRHQ9HD43 1115 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 GLP2RO95838 553 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 MLNP12872 115 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 ARL2P36404 184 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 RPS6KA3P51812 740 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 MRPS15P82914 257 aaKnown RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 GTF2H3Q13889 308 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 PCID2Q5JVF3 399 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 RNF145Q96MT1 663 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 CSPG4P5Q96PW8 444 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 PPM1HQ9ULR3 514 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 TMCO1Q9UM00 188 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 TIMM13Q9Y5L4 95 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 TRAFD1O14545 582 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 DHX15O43143 795 aaKnown RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 CABYRO75952 493 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 RTN3O95197 1032 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 KRT8P05787 483 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 TPP2P29144 1249 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 HK2P52789 917 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 PIWIL4Q7Z3Z4 852 aaKnown RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 OLA1Q9NTK5 396 aaKnown RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 MRPL42Q9Y6G3 142 aaKnown RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 KLF1Q13351 362 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 DMC1Q14565 340 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 NEPROQ6NW34 567 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 ASRGL1Q7L266 308 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 APOL5Q9BWW9 433 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 ZNF395Q9H8N7 513 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 RGS18Q9NS28 235 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 GALNT8Q9NY28 637 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 RAB26Q9ULW5 256 aa15.26■□□□□ 0.03
ARHGEF40-207ENST00000556399 LINGO3P0C6S8 592 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 HNRNPLP14866 589 aaKnown RBP eCLIP15.25■□□□□ 0.033e-7■■□□□ 13
ARHGEF40-207ENST00000556399 FAM182AQ5T1J6 154 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 SLC39A4Q6P5W5 647 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 LCLAT1Q6UWP7 414 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 KIAA0319LQ8IZA0 1049 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 HSFY1Q96LI6 401 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 ULBP1Q9BZM6 244 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 TKTL2Q9H0I9 626 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 DNAJB4Q9UDY4 337 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 METTL21CQ5VZV1 264 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 PTRHD1Q6GMV3 140 aaKnown RBP15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 CATSPERGQ6ZRH7 1159 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 HORMAD1Q86X24 394 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 P3H2Q8IVL5 708 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 ANKRD52Q8NB46 1076 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 GPRC5AQ8NFJ5 357 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 SYTL2Q9HCH5 934 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 TMEM216Q9P0N5 145 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 CCR1P32246 355 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 PSEN1P49768 467 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 RAB10P61026 200 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 OGDHQ02218 1023 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 GRIK4Q16099 956 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 SIAH1Q8IUQ4 282 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 P2RX7Q99572 595 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms