RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 IL17FQ96PD4 163 aa3.58□□□□□ -1.84
SCFD1-218ENST00000556256 KLHL31Q9H511 634 aa3.58□□□□□ -1.84
SCFD1-218ENST00000556256 KCNK9Q9NPC2 374 aa3.58□□□□□ -1.84
SCFD1-218ENST00000556256 SCRT2Q9NQ03 307 aa3.58□□□□□ -1.84
SCFD1-218ENST00000556256 PHTF1Q9UMS5 762 aa3.58□□□□□ -1.84
SCFD1-218ENST00000556256 UBE2J1Q9Y385 318 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-218ENST00000556256 ADAM18Q9Y3Q7 739 aa3.58□□□□□ -1.84
SCFD1-218ENST00000556256 RAI2Q9Y5P3 530 aa3.58□□□□□ -1.84
SCFD1-218ENST00000556256 A0A1B0GU03 582 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 PQBP1O60828 265 aaKnown RBP3.57□□□□□ -1.84
SCFD1-218ENST00000556256 APOHP02749 345 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-218ENST00000556256 NBPF7P0C2Y1 421 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-218ENST00000556256 NAGAP17050 411 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 IGFBP2P18065 325 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 RPL17P18621 184 aaKnown RBP3.57□□□□□ -1.84
SCFD1-218ENST00000556256 ANOS1P23352 680 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 AVPR1AP37288 418 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 HTR3AP46098 478 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 PPP3CCP48454 512 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 CASP5P51878 434 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 TROAPQ12815 778 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 DMP1Q13316 513 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-218ENST00000556256 HDAC1Q13547 482 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-218ENST00000556256 MSANTD2Q6P1R3 559 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 USP17L6PQ6QN14 398 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 C9orf139Q6ZV77 190 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 DGLUCYQ7Z3D6 616 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 IGFN1Q86VF2 1251 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 CCDC25Q86WR0 208 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 KLHDC8BQ8IXV7 354 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 LRRC57Q8N9N7 239 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 PHKBQ93100 1093 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 GRAMD1AQ96CP6 724 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 UHRF2Q96PU4 802 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 SLC25A33Q9BSK2 321 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 APOL5Q9BWW9 433 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 NUP62CLQ9H1M0 184 aa3.57□□□□□ -1.84
SCFD1-218ENST00000556256 ZMYND8Q9ULU4 1186 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-218ENST00000556256 SAA2-SAA4A0A096LPE2 208 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 IGKV3D-20A0A0C4DH25 116 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 GXYLT2A0PJZ3 443 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 TULP2O00295 520 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 DHHO43323 396 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 XPNPEP2O43895 674 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 VIPP01282 170 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 AMD1P17707 334 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 PIK3CBP42338 1070 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 ERVK11-1P61568 191 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 ST3GAL1Q11201 340 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 ARL13AQ5H913 290 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-218ENST00000556256 PLEKHA7Q6IQ23 1121 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 PPP4R4Q6NUP7 873 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 NAGSQ8N159 534 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 PCDHAC2Q9Y5I4 1007 aa3.56□□□□□ -1.84
SCFD1-218ENST00000556256 CLCA1A8K7I4 914 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 PRAC2D3DTV9 90 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 PEX14O75381 377 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 KLRC2P26717 231 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 SERPINB3P29508 390 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 PRIM2P49643 509 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 AK2P54819 239 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 ZNF543Q08ER8 600 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 SNTA1Q13424 505 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 ARHGAP15Q53QZ3 475 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 HEPHL1Q6MZM0 1159 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 TOGARAM2Q6ZUX3 1019 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 KLBQ86Z14 1044 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 DPP10Q8N608 796 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 RNF152Q8N8N0 203 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 WDSUB1Q8N9V3 476 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 SLC22A17Q8WUG5 538 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 FAR2Q96K12 515 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 RPS6KC1Q96S38 1066 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 ELAC2Q9BQ52 826 aaKnown RBP3.55□□□□□ -1.84
SCFD1-218ENST00000556256 UNKQ9C0B0 810 aaKnown RBP3.55□□□□□ -1.84
SCFD1-218ENST00000556256 PCDHAC1Q9H158 963 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 FNIP2Q9P278 1114 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 MALT1Q9UDY8 824 aa3.55□□□□□ -1.84
SCFD1-218ENST00000556256 AGO1Q9UL18 857 aaKnown RBP3.55□□□□□ -1.84
SCFD1-218ENST00000556256 RASA4BC9J798 803 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 NKX2-8O15522 239 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 RASA4O43374 803 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 SERPINI2O75830 405 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 MYL3P08590 195 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 IFIT2P09913 472 aaKnown RBP3.54□□□□□ -1.84
SCFD1-218ENST00000556256 TSHRP16473 764 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 STAT1P42224 750 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 ADPRHP54922 357 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 IFIT5Q13325 482 aaKnown RBP3.54□□□□□ -1.84
SCFD1-218ENST00000556256 MORC3Q14149 939 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 RBBP5Q15291 538 aaKnown RBP3.54□□□□□ -1.84
SCFD1-218ENST00000556256 LONRF1Q17RB8 773 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 SLC5A9Q2M3M2 681 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 DPP9Q86TI2 863 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 SPICE1Q8N0Z3 855 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 HORMAD2Q8N7B1 307 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 IL17RCQ8NAC3 791 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 MIGA1Q8NAN2 632 aa3.54□□□□□ -1.84
SCFD1-218ENST00000556256 PARD3BQ8TEW8 1205 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms