RNA–Protein interactions for RNA: ENST00000555437.5

CIPC-205, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3 BASIC

Gene CIPC, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-205ENST00000555437 HMGB4Q8WW32 186 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 TPSD1Q9BZJ3 242 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 MUC3BQ9H195 1237 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 SLC6A17Q9H1V8 727 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 RSPH9Q9H1X1 276 aaPredicted RBP17.51■□□□□ 0.39
CIPC-205ENST00000555437 MTG2Q9H4K7 406 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 CATSPERBQ9H7T0 1116 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 SUN2Q9UH99 717 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 DNAI1Q9UI46 699 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 LAMA1P25391 3075 aa17.51■□□□□ 0.39
CIPC-205ENST00000555437 RIF1Q5UIP0 2472 aaKnown RBP17.5■□□□□ 0.39
CIPC-205ENST00000555437 PI4KAP42356 2102 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 BTNL10A8MVZ5 291 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 C10orf142B7Z368 130 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 EEF2KO00418 725 aaKnown RBP17.5■□□□□ 0.39
CIPC-205ENST00000555437 PJA2O43164 708 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 SIN3BO75182 1162 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 ZNF821O75541 412 aaPredicted RBP17.5■□□□□ 0.39
CIPC-205ENST00000555437 RPP40O75818 363 aaKnown RBP17.5■□□□□ 0.39
CIPC-205ENST00000555437 MT-CO1P00395 513 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 ETFBP38117 255 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 YBEYP58557 167 aaPredicted RBP17.5■□□□□ 0.39
CIPC-205ENST00000555437 KRT83P78385 493 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 ARHGAP12Q8IWW6 846 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 VOPP1Q96AW1 172 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 FAM129BQ96TA1 746 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 GRPEL1Q9HAV7 217 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 PCDH18Q9HCL0 1135 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 CD93Q9NPY3 652 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.5■□□□□ 0.39
CIPC-205ENST00000555437 RCOR3Q9P2K3 495 aaPredicted RBP17.5■□□□□ 0.39
CIPC-205ENST00000555437 MBD1Q9UIS9 605 aaPredicted RBP17.5■□□□□ 0.39
CIPC-205ENST00000555437 SALL4Q9UJQ4 1053 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 TFR2Q9UP52 801 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 DOCK9Q9BZ29 2069 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 GVINP1Q7Z2Y8 2422 aa17.5■□□□□ 0.39
CIPC-205ENST00000555437 EDDM13A0A1B0GTR0 161 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 DCLK1O15075 740 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 SYNCRIPO60506 623 aaKnown RBP17.49■□□□□ 0.39
CIPC-205ENST00000555437 RAMP2O60895 175 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 VAV1P15498 845 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 ERCC2P18074 760 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 NUMBP49757 651 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 SERPINH1P50454 418 aaKnown RBP17.49■□□□□ 0.39
CIPC-205ENST00000555437 CLCN6P51797 869 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 GSDMDP57764 484 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 ST8SIA6P61647 398 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 ASCL5Q7RTU5 278 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 TMPRSS6Q8IU80 811 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 NPWQ8N729 165 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 NKD2Q969F2 451 aaPredicted RBP17.49■□□□□ 0.39
CIPC-205ENST00000555437 FAM131CQ96AQ9 280 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 FAF2Q96CS3 445 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 CSPG4P5Q96PW8 444 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 DUSP15Q9H1R2 295 aaPredicted RBP17.49■□□□□ 0.39
CIPC-205ENST00000555437 ZWILCHQ9H900 591 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 PRDM16Q9HAZ2 1276 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 PDFQ9HBH1 243 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 ATP13A1Q9HD20 1204 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 ITM2CQ9NQX7 267 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 SLC25A13Q9UJS0 675 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 SMG5Q9UPR3 1016 aaKnown RBP17.49■□□□□ 0.39
CIPC-205ENST00000555437 PLXNA2O75051 1894 aa17.49■□□□□ 0.39
CIPC-205ENST00000555437 IGHV1OR15-9A0A0B4J2B8 117 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 SMAD6O43541 496 aaKnown RBP17.48■□□□□ 0.39
CIPC-205ENST00000555437 KDELR3O43731 214 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
CIPC-205ENST00000555437 BCKDHBP21953 392 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 NDST2P52849 883 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 RPS14P62263 151 aaKnown RBP17.48■□□□□ 0.39
CIPC-205ENST00000555437 SLC20A2Q08357 652 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 SERINC3Q13530 473 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 MESDQ14696 234 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 POLD3Q15054 466 aaPredicted RBP17.48■□□□□ 0.39
CIPC-205ENST00000555437 SPA17Q15506 151 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 PARP15Q460N3 678 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 PLK5Q496M5 336 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 ATP13A4Q4VNC1 1196 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 USP39Q53GS9 565 aaKnown RBP17.48■□□□□ 0.39
CIPC-205ENST00000555437 PPP6R3Q5H9R7 873 aaPredicted RBP17.48■□□□□ 0.39
CIPC-205ENST00000555437 FRMD1Q8N878 549 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 ACRBPQ8NEB7 543 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 FAM122AQ96E09 287 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 SDK1Q7Z5N4 2213 aa17.48■□□□□ 0.39
CIPC-205ENST00000555437 LRRK1Q38SD2 2015 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 EP300Q09472 2414 aaPredicted RBP17.47■□□□□ 0.39
CIPC-205ENST00000555437 C3orf70A6NLC5 250 aaPredicted RBP17.47■□□□□ 0.39
CIPC-205ENST00000555437 ZNF487B1APH4 448 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 RASA4BC9J798 803 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 H3BRJ5 948 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 K7ERQ8 282 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 ALOX15BO15296 676 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 RASA4O43374 803 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 ZNF217O75362 1048 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 CD48P09326 243 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 VAV2P52735 878 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 ZBTB16Q05516 673 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 SIM2Q14190 667 aaPredicted RBP17.47■□□□□ 0.39
CIPC-205ENST00000555437 DPYSL3Q14195 570 aa17.47■□□□□ 0.39
CIPC-205ENST00000555437 ELAVL3Q14576 367 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms