RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DUS1LQ6P1R4 473 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC27A1Q6PCB7 646 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 TRIM67Q6ZTA4 783 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF534Q76KX8 674 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PHTF2Q8N3S3 785 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PQLC3Q8N755 202 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 TRIML2Q8N7C3 387 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 TERB1Q8NA31 727 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PDCD6IPQ8WUM4 868 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SGF29Q96ES7 293 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 CCT7Q99832 543 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 SNRNP25Q9BV90 132 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PNPLA3Q9NST1 481 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 EPS15L1Q9UBC2 864 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PTBP2Q9UKA9 531 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 PLXNA1Q9UIW2 1896 aa10.91□□□□□ -0.66
MTHFD1-210ENST00000555252 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 TRIM64CA6NLI5 447 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 H3BSA7 217 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 ALDOAP04075 364 aaKnown RBP10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 MAGEA12P43365 314 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 PSMD8P48556 350 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 RGS7P49802 495 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 SEMA5AQ13591 1074 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 ZBTB6Q15916 424 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 DPYSL2Q16555 572 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 SYCP2LQ5T4T6 812 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 PMF1Q6P1K2 205 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 LRRC8BQ6P9F7 803 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 TRMT10BQ6PF06 316 aaKnown RBP10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 IYDQ6PHW0 289 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 LPCAT2Q7L5N7 544 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 TTC30AQ86WT1 665 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 C10orf107Q8IVU9 208 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 HACE1Q8IYU2 909 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 DSELQ8IZU8 1212 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 TMEM102Q8N9M5 508 aaPredicted RBP10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 PCDH19Q8TAB3 1148 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 RIN3Q8TB24 985 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 CENPIQ92674 756 aaPredicted RBP10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 ITPKCQ96DU7 683 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 DUS3LQ96G46 650 aaKnown RBP10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 SNX27Q96L92 541 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 PPP1R16BQ96T49 567 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 MRPL45Q9BRJ2 306 aaKnown RBP10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 TCF7L2Q9NQB0 619 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 RRN3Q9NYV6 651 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 MORF4L1Q9UBU8 362 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 MYRFQ9Y2G1 1151 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 SNX9Q9Y5X1 595 aa10.9□□□□□ -0.66
MTHFD1-210ENST00000555252 hCG_2014768A0A024R1R8 64 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 LOC100653049A0A140TA62 436 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 FAM155AB1AL88 458 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 SLCO1B7G3V0H7 640 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 H3BNH8 94 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 TPP1O14773 563 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ZBTB14O43829 449 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF189O75820 626 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 KRT34O76011 436 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 CD4P01730 458 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF286BP0CG31 522 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF12P17014 697 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 KCNA4P22459 653 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 PIK3R1P27986 724 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 RBL1P28749 1068 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ADORA2AP29274 412 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 TTKP33981 857 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 RPL34P49207 117 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 NUDT2P50583 147 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 MRPS22P82650 360 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 MOB2Q70IA6 237 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 SLC26A9Q7LBE3 791 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ACOT1Q86TX2 421 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 RSPH3Q86UC2 560 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 CARM1Q86X55 608 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 CNTD1Q8N815 330 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 C12orf29Q8N999 325 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ADAMTS16Q8TE57 1224 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 KATNBL1Q9H079 304 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 COG4Q9H9E3 785 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 PALMDQ9NP74 551 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 XPNPEP3Q9NQH7 507 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 EIF2B3Q9NR50 452 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 GTF2IRD1Q9UHL9 959 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 CDH7Q9ULB5 785 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 SLC8A2Q9UPR5 921 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 HEY1Q9Y5J3 304 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 HACD1B0YJ81 288 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 PIK3R2O00459 728 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 PAPSS1O43252 624 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 XPOTO43592 962 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 GRAP2O75791 330 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 PRKCGP05129 697 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF26P17031 533 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 CYP2F1P24903 491 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 AXLP30530 894 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ADCYAP1R1P41586 468 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 BCAT1P54687 386 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms