RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 FRG2BQ96QU4 278 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 CLSTN3Q9BQT9 956 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 IFT27Q9BW83 186 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 LMAN2LQ9H0V9 348 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 FBXO4Q9UKT5 387 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 SLC22A23A1A5C7 686 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 OR6C68A6NDL8 312 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 C17orf100A8MU93 164 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 DDX58O95786 925 aaKnown RBP5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 NUDT3O95989 172 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 PRKCGP05129 697 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 LCKP06239 509 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 FCGR2AP12318 317 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 CYP2J2P51589 502 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 CCR9P51686 369 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 ZBTB16Q05516 673 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 PTP4A2Q12974 167 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 SLC18A3Q16572 532 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 TSTQ16762 297 aaKnown RBP5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 PLK5Q496M5 336 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 FAM171A1Q5VUB5 890 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 H1FNTQ75WM6 255 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 CYB5R4Q7L1T6 521 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 MON1AQ86VX9 555 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 GHDCQ8N2G8 530 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 ARL14EPQ8N8R7 260 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 TDRD7Q8NHU6 1098 aaKnown RBP5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 ADAMTS15Q8TE58 950 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 FAM118BQ9BPY3 351 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 MLXIPLQ9NP71 852 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 SEMA4BQ9NPR2 832 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 TAS2R10Q9NYW0 307 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 HDAC6Q9UBN7 1215 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 FBXO40Q9UH90 709 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 CNPY2Q9Y2B0 182 aa5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 POLR2AP24928 1970 aaKnown RBP5.85□□□□□ -1.47
CKS1BP1-201ENST00000555221 WDR17Q8IZU2 1322 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 ZNF335Q9H4Z2 1342 aaPredicted RBP5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 TCRBV7S3A2A0A539 114 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 DPPA5A6NC42 116 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 CHMP24386 653 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 NHLH1Q02575 133 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 FOXF2Q12947 444 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 KIAA1755Q5JYT7 1200 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 CCDC30Q5VVM6 783 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 TMEM268Q5VZI3 342 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 NAPEPLDQ6IQ20 393 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 MIS18BP1Q6P0N0 1132 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 CLEC4GQ6UXB4 293 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 ZNF788Q6ZQV5 615 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 RRM2BQ7LG56 351 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 UBE2Q1Q7Z7E8 422 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 CHD1LQ86WJ1 897 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 SETD9Q8NE22 299 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 HSPH1Q92598 858 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 CENPIQ92674 756 aaPredicted RBP5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 KIF1BPQ96EK5 621 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 CLMNQ96JQ2 1002 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 TEFMQ96QE5 360 aaKnown RBP5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 IL1RAPL1Q9NZN1 696 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 KCND2Q9NZV8 630 aa5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 ORC3Q9UBD5 711 aaPredicted RBP5.84□□□□□ -1.47
CKS1BP1-201ENST00000555221 C17orf113A0A1B0GUU1 675 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 CXorf65A6NEN9 183 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 MANSC4A6NHS7 340 aaPredicted RBP5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 C2CD4BA6NLJ0 364 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 CBX6O95503 412 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 SLPIP03973 132 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 TUBB4AP04350 444 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 URODP06132 367 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 BMP5P22003 454 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 CERS1P27544 350 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 STIM1Q13586 685 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 SLC9C1Q4G0N8 1177 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 EARS2Q5JPH6 523 aaKnown RBP5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 MEX3CQ5U5Q3 659 aaKnown RBP5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 ATF7IPQ6VMQ6 1270 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 RD3Q7Z3Z2 195 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 IGFN1Q86VF2 1251 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 GALNT16Q8N428 558 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 SLC25A18Q9H1K4 315 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 TTYH1Q9H313 450 aaPredicted RBP5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 R3HDMLQ9H3Y0 253 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 MOV10Q9HCE1 1003 aaKnown RBP5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 ENTPD7Q9NQZ7 604 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 CAMK2AQ9UQM7 478 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 NAALADL1Q9UQQ1 740 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 CLDN16Q9Y5I7 305 aa5.83□□□□□ -1.48
CKS1BP1-201ENST00000555221 TDRD9Q8NDG6 1382 aaKnown RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 CYP2D7A0A087X1C5 515 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 KIF1CO43896 1103 aaKnown RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 CEP104O60308 925 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 DDAH2O95865 285 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 HSPA1AP0DMV8 641 aaKnown RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 HSPA1BP0DMV9 641 aaKnown RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 COX7A2P14406 83 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms