RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SLC45A4Q5BKX6 768 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 KCNT1Q5JUK3 1230 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 OTUD1Q5VV17 481 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-203ENST00000554074 ZNF783Q6ZMS7 281 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 TMPRSS7Q7RTY8 843 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 BNIPLQ7Z465 357 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 IQCHQ86VS3 1027 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 TRIM69Q86WT6 500 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 CIR1Q86X95 450 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-203ENST00000554074 ZNF677Q86XU0 584 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 GALNT15Q8N3T1 639 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 OXR1Q8N573 874 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 SH2D3CQ8N5H7 860 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 MFSD2AQ8NA29 543 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 MSANTD4Q8NCY6 345 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 OR52K2Q8NGK3 314 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 OR14C36Q8NHC7 312 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 RHBDD1Q8TEB9 315 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 C18orf8Q96DM3 657 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 SLC6A18Q96N87 628 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 ELF4Q99607 663 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-203ENST00000554074 C2orf49Q9BVC5 232 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-203ENST00000554074 RETREG1Q9H6L5 497 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 WDCPQ9H6R7 721 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 EBF2Q9HAK2 575 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 PLCB1Q9NQ66 1216 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 PIGVQ9NUD9 493 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 DKK4Q9UBT3 224 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 VANGL2Q9ULK5 521 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 PPM1HQ9ULR3 514 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 DMTF1Q9Y222 760 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 PCDHGA1Q9Y5H4 931 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 FHOD1Q9Y613 1164 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 ATRXP46100 2492 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 SYNJ2BP-COX16A0A087WUM0 186 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 DRGXA6NNA5 263 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 E9PAM4 449 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 F8VZ95 297 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 I6L893 689 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 MAGEC1O60732 1142 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 RNGTTO60942 597 aaKnown RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ENDOD1O94919 500 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ADCY5O95622 1261 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 WNT1P04628 370 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 C1SP09871 688 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ATXN1LP0C7T5 689 aaKnown RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 PNMA6AP0CW24 399 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 UCHL3P15374 230 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 VAV1P15498 845 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 RXRGP48443 463 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ARRB1P49407 418 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 SULT1E1P49888 294 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 IRAK1P51617 712 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 DEUP1Q05D60 604 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 CCDC15Q0P6D6 951 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 RAPGEF1Q13905 1077 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 DLG2Q15700 870 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 TCP11X2Q5H9J9 407 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 C6orf118Q5T5N4 469 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 NAPEPLDQ6IQ20 393 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 NEK5Q6P3R8 708 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 SASS6Q6UVJ0 657 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 LAYNQ6UX15 382 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 LRRC31Q6UY01 552 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 C14orf80Q86SX3 495 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 PRPF39Q86UA1 669 aaKnown RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ERICH1Q86X53 443 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 PROSER1Q86XN7 944 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 XYLT1Q86Y38 959 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 DCAF4L2Q8NA75 395 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 TMIEQ8NEW7 156 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ENOX1Q8TC92 643 aaKnown RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 EPS8L1Q8TE68 723 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 SAP25Q8TEE9 199 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 SERAC1Q96JX3 654 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 CCDC114Q96M63 670 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 HAPLN3Q96S86 360 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 PSMB7Q99436 277 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ANP32EQ9BTT0 268 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 STK33Q9BYT3 514 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 TKTL2Q9H0I9 626 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 PDCL3Q9H2J4 239 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 PREBQ9HCU5 417 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 GDF3Q9NR23 364 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 AASDHPPTQ9NRN7 309 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ANO10Q9NW15 660 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 COX16Q9P0S2 106 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ARHGAP20Q9P2F6 1191 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 PPARGC1AQ9UBK2 798 aaKnown RBP6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ZNF212Q9UDV6 495 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 TMEM59LQ9UK28 342 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 VPS28Q9UK41 221 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 BTBD3Q9Y2F9 522 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 ASXL3Q9C0F0 2248 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 NBEAQ8NFP9 2946 aa6.78□□□□□ -1.32
SLIRP-203ENST00000554074 RP1P56715 2156 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3DA0A087WVF3 549 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3IA0A087WXS9 549 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3EA0A087X179 549 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms