RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 E7EVH7 732 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 KCNK1O00180 336 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 SMAPO00193 183 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 RNF103O00237 685 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 KDELR3O43731 214 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 MAFKO60675 156 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 ECI2O75521 394 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 JCHAINP01591 159 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 TYRP14679 529 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 PSMC3P17980 439 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 RPL22P35268 128 aaKnown RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 FDFT1P37268 417 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 LMAN1P49257 510 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 SGSHP51688 502 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 GEMIN4P57678 1058 aaKnown RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 SMAD4Q13485 552 aaKnown RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 SERINC3Q13530 473 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 HNRNPDQ14103 355 aaKnown RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 PRPSAP1Q14558 356 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 RFTN1Q14699 578 aaPredicted RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 BRD3Q15059 726 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 DHCR24Q15392 516 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 PREPLQ4J6C6 727 aaPredicted RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 TEX44Q53QW1 395 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 HABP4Q5JVS0 413 aaKnown RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 ANKRD20A2Q5SQ80 823 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 LY6G5CQ5SRR4 150 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 ARTNQ5T4W7 220 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 ANKRD20A1Q5TYW2 823 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 ANKRD20A3Q5VUR7 823 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 TANGO2Q6ICL3 276 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 CEP128Q6ZU80 1094 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 CPA6Q8N4T0 437 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 NETO2Q8NC67 525 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 SUSD6Q92537 303 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 SPATA13Q96N96 652 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 ZNF599Q96NL3 588 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 C2orf49Q9BVC5 232 aaPredicted RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 TSPYL1Q9H0U9 437 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 NOL6Q9H6R4 1146 aaKnown RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 GDF3Q9NR23 364 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 PLK2Q9NYY3 685 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 MARK1Q9P0L2 795 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 WHRNQ9P202 907 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 ZNF212Q9UDV6 495 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 MTRF1LQ9UGC7 380 aaKnown RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 TPX2Q9ULW0 747 aaKnown RBP10.69□□□□□ -0.7
TMEM55B-205ENST00000554028 CBX4O00257 560 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 DNALI1O14645 258 aaPredicted RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 CHADO15335 359 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 PSMD3O43242 534 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 PRAMEF11O60813 436 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 PENKP01210 267 aaPredicted RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 ZSCAN5DPP0CG00 497 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 ADH5P11766 374 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 ETS1P14921 441 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 VAV1P15498 845 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 HOXD9P28356 352 aaPredicted RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 ACVRL1P37023 503 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 GDF10P55107 478 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 IFI35P80217 286 aaPredicted RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 BASP1P80723 227 aaKnown RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 SARNPP82979 210 aaKnown RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 SLC20A2Q08357 652 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 DMC1Q14565 340 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 NAA30Q147X3 362 aaPredicted RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 PARP6Q2NL67 630 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 EML3Q32P44 896 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 PUS10Q3MIT2 529 aaKnown RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 FYB2Q5VWT5 728 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 IZUMO3Q5VZ72 239 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 CXorf57Q6NSI4 855 aaKnown RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 RETSATQ6NUM9 610 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 RHBDF2Q6PJF5 856 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 VITQ6UXI7 678 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 CCNI2Q6ZMN8 369 aaPredicted RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 NUDT18Q6ZVK8 323 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 Q7L0L9 218 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 METTL3Q86U44 580 aaKnown RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 TP53INP2Q8IXH6 220 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 OR7D4Q8NG98 312 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 RIN3Q8TB24 985 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 CCDC110Q8TBZ0 833 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 LRRN4Q8WUT4 740 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 NXPE3Q969Y0 559 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 ACDQ96AP0 544 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 FEM1AQ9BSK4 669 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 TRMT61BQ9BVS5 477 aaKnown RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 EPC1Q9H2F5 836 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 RAB6BQ9NRW1 208 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 RBM22Q9NW64 420 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 EPS15L1Q9UBC2 864 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 UBA2Q9UBT2 640 aaPredicted RBP10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 RAB21Q9UL25 225 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 NEU2Q9Y3R4 380 aa10.68□□□□□ -0.7
TMEM55B-205ENST00000554028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.67□□□□□ -0.7
TMEM55B-205ENST00000554028 A0A0D9SEW6 157 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms