RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 VAMP2P63027 116 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 TRPC3Q13507 836 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 ALKBH1Q13686 389 aaKnown RBP5.7□□□□□ -1.5
FOXN3-206ENST00000554005 GPR162Q16538 588 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 JAKMIP3Q5VZ66 844 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 ATG16L1Q676U5 607 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 DENND1BQ6P3S1 775 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 PTF1AQ7RTS3 328 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 SCN4BQ8IWT1 228 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 OR52N4Q8NGI2 321 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 OSR1Q8TAX0 266 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-206ENST00000554005 ZFPM2Q8WW38 1151 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 PIGKQ92643 395 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 HTRA1Q92743 480 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 DPF1Q92782 380 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 NELL1Q92832 810 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 MAP4K1Q92918 833 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 PPP1R10Q96QC0 940 aaKnown RBP5.7□□□□□ -1.5
FOXN3-206ENST00000554005 ERVK-5Q9HDB9 667 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 TXNRD2Q9NNW7 524 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.7□□□□□ -1.5
FOXN3-206ENST00000554005 THAP1Q9NVV9 213 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 KLQ9UEF7 1012 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 PKP3Q9Y446 797 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 SPATA31D1Q6ZQQ2 1576 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 CEP170BQ9Y4F5 1589 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-206ENST00000554005 POLR1AO95602 1720 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-206ENST00000554005 PLA2R1Q13018 1463 aa5.7□□□□□ -1.5
FOXN3-206ENST00000554005 E9PCH4 1651 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 TRPM2O94759 1503 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 NOS1P29475 1434 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 INPPL1O15357 1258 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 LATS1O95835 1130 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 RPS6KB1P23443 525 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 HOXA7P31268 230 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-206ENST00000554005 SLC10A2Q12908 348 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-206ENST00000554005 MTA1Q13330 715 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 ZNF268Q14587 947 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-206ENST00000554005 GXYLT1Q4G148 440 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 RUNDC3AQ59EK9 446 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 ANO7Q6IWH7 933 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 MTFR2Q6P444 385 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 TMEM200AQ86VY9 491 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 UEVLDQ8IX04 471 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 VPS52Q8N1B4 723 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 PAF1Q8N7H5 531 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.69□□□□□ -1.5
FOXN3-206ENST00000554005 STAMQ92783 540 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 MASTLQ96GX5 879 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 NAP1L4Q99733 375 aaKnown RBP5.69□□□□□ -1.5
FOXN3-206ENST00000554005 GPR63Q9BZJ6 419 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 TRIM31Q9BZY9 425 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 SLC13A4Q9UKG4 626 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 GDAQ9Y2T3 454 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 AFG3L2Q9Y4W6 797 aa5.69□□□□□ -1.5
FOXN3-206ENST00000554005 SETD1BQ9UPS6 1966 aaKnown RBP5.69□□□□□ -1.5
FOXN3-206ENST00000554005 CCDC144AA2RUR9 1427 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 UHRF1BP1Q6BDS2 1440 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 A0A0U1RQG5 324 aaPredicted RBP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 SLC22A23A1A5C7 686 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 PEX12O00623 359 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 DHX16O60231 1041 aaKnown RBP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 TNNT1P13805 278 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 PKMP14618 531 aaKnown RBP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 ARSAP15289 507 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 MVDP53602 400 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 INTS11Q5TA45 600 aaKnown RBP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 RNF144BQ7Z419 303 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 HEATR4Q86WZ0 1026 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 PAQR4Q8N4S7 273 aaPredicted RBP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 NAXEQ8NCW5 288 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 FAM110DQ8TAY7 271 aaPredicted RBP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 C2CD4CQ8TF44 421 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 ZG16BQ96DA0 208 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 ADAD1Q96M93 576 aaKnown RBP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 PPM1MQ96MI6 270 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 STN1Q9H668 368 aaKnown RBP5.68□□□□□ -1.5
FOXN3-206ENST00000554005 PDGFCQ9NRA1 345 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 CD207Q9UJ71 328 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 SLC25A13Q9UJS0 675 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 ERVK-7P63135 1459 aa5.68□□□□□ -1.5
FOXN3-206ENST00000554005 STRCQ7RTU9 1775 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 SYN3O14994 580 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 RBMXL2O75526 392 aaKnown RBP5.67□□□□□ -1.5
FOXN3-206ENST00000554005 METTL18O95568 372 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 CYP4B1P13584 511 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 HOXB9P17482 250 aaPredicted RBP5.67□□□□□ -1.5
FOXN3-206ENST00000554005 XBP1P17861 261 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 LIFRP42702 1097 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 TUBP50607 506 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 RPS6KA3P51812 740 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 FOXF2Q12947 444 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 MAPK7Q13164 816 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 SEMA3AQ14563 771 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 ARL13AQ5H913 290 aaPredicted RBP5.67□□□□□ -1.5
FOXN3-206ENST00000554005 WDR45BQ5MNZ6 344 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 MEX3CQ5U5Q3 659 aaKnown RBP5.67□□□□□ -1.5
FOXN3-206ENST00000554005 LIPMQ5VYY2 423 aa5.67□□□□□ -1.5
FOXN3-206ENST00000554005 SLC30A9Q6PML9 568 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms