RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 LRRC6Q86X45 466 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 DENND1CQ8IV53 801 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 IPMKQ8NFU5 416 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 OR52K2Q8NGK3 314 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 ATP2A3Q93084 1043 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 PSMG2Q969U7 264 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 LRRC39Q96DD0 335 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 ZNF778Q96MU6 729 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 SLC22A12Q96S37 553 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 NKIRAS1Q9NYS0 192 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 HMX2A2RU54 273 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 PRRG1O14668 218 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 KIAA0355O15063 1070 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 TEX28O15482 410 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 KLKB1P03952 638 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 URODP06132 367 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 PYGBP11216 843 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 GMPRP36959 345 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 CDK16Q00536 496 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 CBLBQ13191 982 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 SLC26A11Q86WA9 606 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 LGI2Q8N0V4 545 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 DENND1AQ8TEH3 1009 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 PABPC5Q96DU9 382 aaKnown RBP13□□□□□ -0.33
VIPAS39-206ENST00000553888 MFSD3Q96ES6 412 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 TSGA13Q96PP4 275 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 BRD8Q9H0E9 1235 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 ALG13Q9NP73 1137 aaKnown RBP13□□□□□ -0.33
VIPAS39-206ENST00000553888 FGFR1OP2Q9NVK5 253 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 ZNF212Q9UDV6 495 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 FETUBQ9UGM5 382 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 TRHDEQ9UKU6 1024 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 ACTL7BQ9Y614 415 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 CHD5Q8TDI0 1954 aa13□□□□□ -0.33
VIPAS39-206ENST00000553888 WDR91A4D1P6 747 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 FAM159BA6NKW6 160 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 GOLGA8TH3BQL2 631 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 NRG2O14511 850 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 MATN3O15232 486 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 PMPCBO75439 489 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 SPAG6O75602 509 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 PEX11BO96011 259 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 MLNP12872 115 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 TACR2P21452 398 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ATP5C1P36542 298 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ETFBP38117 255 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ABCG1P45844 678 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 COG7P83436 770 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 NRG1Q02297 640 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 SLC10A7Q0GE19 358 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 IHHQ14623 411 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 FAM133BQ5BKY9 247 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 MROH9Q5TGP6 573 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 IL12RB2Q99665 862 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 HERC2P3Q9BVR0 1158 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ZNF334Q9HCZ1 680 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 CASS4Q9NQ75 786 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 CHRAC1Q9NRG0 131 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 MOCS1Q9NZB8 636 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 IGLV3-10A0A075B6K4 115 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 MTSS1O43312 755 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 MT-ND3P03897 115 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 RHOQP17081 205 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ADRA1DP25100 572 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 CHRNA4P43681 627 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 RPS24P62847 133 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 NR1H3Q13133 447 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 RASA2Q15283 850 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 PCSK7Q16549 785 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 STEAP4Q687X5 459 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ITPRIPL1Q6GPH6 555 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 TMEM199Q8N511 208 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ANKLE1Q8NAG6 615 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 TCP10LQ8TDR4 215 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 CKAP2Q8WWK9 683 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ZNF669Q96BR6 464 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 GLOD4Q9HC38 313 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 TMEM248Q9NWD8 314 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 REV3LO60673 3130 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 A0A0D9SEW6 157 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 SUN1O94901 812 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ASMTLO95671 621 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 LAG3P18627 525 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 PGAM1P18669 254 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 ALDH1A3P47895 512 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 TAF12Q16514 161 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 LVRNQ6Q4G3 990 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 CDHR3Q6ZTQ4 885 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 TMEM150AQ86TG1 271 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 CMTR2Q8IYT2 770 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 LZTR1Q8N653 840 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 AZIN2Q96A70 460 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 THOC1Q96FV9 657 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 TGS1Q96RS0 853 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 FICDQ9BVA6 458 aa12.99□□□□□ -0.33
VIPAS39-206ENST00000553888 OXCT2Q9BYC2 517 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms