RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 C19orf53Q9UNZ5 99 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-210ENST00000553693 LRCH1Q9Y2L9 728 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 PTGDR2Q9Y5Y4 395 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 BICRAQ9NZM4 1560 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 NOTCH4Q99466 2003 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 A0A1B0GVT2 93 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 TCRBV7S3A2A0A539 114 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 INAFM1C9JVW0 142 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 SYT5O00445 386 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 HNRNPRO43390 633 aaKnown RBP4.34□□□□□ -1.71
SCFD1-210ENST00000553693 PLIN1O60240 522 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 SKAP2O75563 359 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-210ENST00000553693 ACTL6BO94805 426 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 PAPSS2O95340 614 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-210ENST00000553693 TNFRSF6BO95407 300 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 PRSS2P07478 247 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 IFIT2P09913 472 aaKnown RBP4.34□□□□□ -1.71
SCFD1-210ENST00000553693 MYZAPP0CAP1 466 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 PRPH2P23942 346 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 MT3P25713 68 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 GAS1P54826 345 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 DSCR9P59020 149 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 ZBTB16Q05516 673 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 TRAF2Q12933 501 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 DUSP6Q16828 381 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 ZACNQ401N2 412 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 TMEM217Q8N7C4 229 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 PIGSQ96S52 555 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 HIPK3Q9H422 1215 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 KLHL31Q9H511 634 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 C6orf106Q9H6K1 298 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-210ENST00000553693 OBP2BQ9NPH6 170 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 TMLHEQ9NVH6 421 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 ZDHHC7Q9NXF8 308 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 HERC5Q9UII4 1024 aaKnown RBP4.34□□□□□ -1.71
SCFD1-210ENST00000553693 BAG5Q9UL15 447 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 LZTS1Q9Y250 596 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 RAP2CQ9Y3L5 183 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 PCDHA10Q9Y5I2 948 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 UNC13AQ9UPW8 1703 aa4.34□□□□□ -1.71
SCFD1-210ENST00000553693 CECR2Q9BXF3 1484 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 LGALS16A8MUM7 142 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 STMND1H3BQB6 276 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 GRM8O00222 908 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 LIASO43766 372 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 KRT86O43790 486 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 CCNT1O60563 726 aaKnown RBP4.33□□□□□ -1.72
SCFD1-210ENST00000553693 HEXIM1O94992 359 aaKnown RBP4.33□□□□□ -1.72
SCFD1-210ENST00000553693 GLUD1P00367 558 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 UNGP13051 313 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-210ENST00000553693 GLUD2P49448 558 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 TRAF1Q13077 416 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 ALKBH1Q13686 389 aaKnown RBP4.33□□□□□ -1.72
SCFD1-210ENST00000553693 KRT81Q14533 505 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 RPS6KA2Q15349 733 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 GXYLT1Q4G148 440 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 FSCBQ5H9T9 825 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 TTC22Q5TAA0 569 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 HEPHL1Q6MZM0 1159 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 XRRA1Q6P2D8 792 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 SLC44A2Q8IWA5 706 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-210ENST00000553693 FRG2BQ96QU4 278 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 IFT27Q9BW83 186 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 CDT1Q9H211 546 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 ELAC1Q9H777 363 aaKnown RBP4.33□□□□□ -1.72
SCFD1-210ENST00000553693 Q9N2J8 555 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 CHST12Q9NRB3 414 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 NDUFAF4Q9P032 175 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 DAPP1Q9UN19 280 aa4.33□□□□□ -1.72
SCFD1-210ENST00000553693 A0A087WV62 115 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 TMCC1O94876 653 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 GSTM2P28161 218 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 AVPR1AP37288 418 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 ART1P52961 327 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 RRP1P56182 461 aaKnown RBP4.32□□□□□ -1.72
SCFD1-210ENST00000553693 TMPRSS3P57727 454 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 AP2B1P63010 937 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 ABATP80404 500 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 TNFAIP2Q03169 654 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 CDK18Q07002 472 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 PFKFB4Q16877 469 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 DGAT2L7PQ6IED9 249 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 C8orf82Q6P1X6 216 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-210ENST00000553693 KLHL17Q6TDP4 642 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 FAM83HQ6ZRV2 1179 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-210ENST00000553693 RBM23Q86U06 439 aaKnown RBP4.32□□□□□ -1.72
SCFD1-210ENST00000553693 HORMAD2Q8N7B1 307 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 POLDIP3Q9BY77 421 aaKnown RBP4.32□□□□□ -1.72
SCFD1-210ENST00000553693 TRIM31Q9BZY9 425 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 PRDM8Q9NQV8 689 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 TMEM248Q9NWD8 314 aa4.32□□□□□ -1.72
SCFD1-210ENST00000553693 C17orf102A2RUQ5 167 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 CLEC18AA5D8T8 446 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 I6L893 689 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-210ENST00000553693 ASAP2O43150 1006 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 GYS1P13807 737 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 PRKCHP24723 683 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 TYK2P29597 1187 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 SERPINA4P29622 427 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 CLCNKBP51801 687 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms