RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 KANSL1Q7Z3B3 1105 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 IQCHQ86VS3 1027 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 MFN1Q8IWA4 741 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 WFDC5Q8TCV5 224 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 FAM149B1Q96BN6 582 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 MYO19Q96H55 970 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 NAF1Q96HR8 494 aaKnown RBP12.18□□□□□ -0.46
SRP54-203ENST00000553544 LMLNQ96KR4 655 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 FAM129BQ96TA1 746 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 DDX50Q9BQ39 737 aaKnown RBP12.18□□□□□ -0.46
SRP54-203ENST00000553544 POPDC2Q9HBU9 364 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 STIM2Q9P246 746 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 TLR6Q9Y2C9 796 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 EDDM13A0A1B0GTR0 161 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 GOLGA6L7A0A1B0GV03 622 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 TYW5A2RUC4 315 aaKnown RBP12.17□□□□□ -0.46
SRP54-203ENST00000553544 C10orf142B7Z368 130 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 LATO43561 262 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 SIGLEC6O43699 453 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 ADH1BP00325 375 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 PNMA6AP0CW24 399 aaPredicted RBP12.17□□□□□ -0.46
SRP54-203ENST00000553544 C6P13671 934 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 SLC6A4P31645 630 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 NUDT1P36639 197 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 YWHAZP63104 245 aaKnown RBP12.17□□□□□ -0.46
SRP54-203ENST00000553544 STAT4Q14765 748 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 DRAP1Q14919 205 aaPredicted RBP12.17□□□□□ -0.46
SRP54-203ENST00000553544 TAF5Q15542 800 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 NADSYN1Q6IA69 706 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 NAPEPLDQ6IQ20 393 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.17□□□□□ -0.46
SRP54-203ENST00000553544 TAC4Q86UU9 113 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 SLC47A2Q86VL8 602 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 SPATS2Q86XZ4 545 aaKnown RBP12.17□□□□□ -0.46
SRP54-203ENST00000553544 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 HIC2Q96JB3 615 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 PPP1R13BQ96KQ4 1090 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 MRGPRX3Q96LB0 322 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 SERPINB11Q96P15 392 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 CPXM1Q96SM3 734 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 TRIM62Q9BVG3 475 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 DPH1Q9BZG8 443 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 CPNE5Q9HCH3 593 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 ASNSD1Q9NWL6 643 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 FHOD1Q9Y613 1164 aa12.17□□□□□ -0.46
SRP54-203ENST00000553544 CYSRT1A8MQ03 144 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 TTC34A8MYJ7 566 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 ARHGAP6O43182 974 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 MOCS3O95396 460 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 IL1BP01584 269 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 GLI1P08151 1106 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 UCHL3P15374 230 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 CDH5P33151 784 aaPredicted RBP12.16□□□□□ -0.46
SRP54-203ENST00000553544 NNMTP40261 264 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 LSSP48449 732 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 PSMD8P48556 350 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 ADPRHP54922 357 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 BPIFB4P59827 614 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 ERVPABLB-1P60509 514 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 PITX1P78337 314 aaPredicted RBP12.16□□□□□ -0.46
SRP54-203ENST00000553544 DAB2P98082 770 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 ECT2LQ008S8 904 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 RNF219Q5W0B1 726 aaPredicted RBP12.16□□□□□ -0.46
SRP54-203ENST00000553544 PASD1Q8IV76 773 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 CARNMT1Q8N4J0 409 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 AADATQ8N5Z0 425 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 HJURPQ8NCD3 748 aaPredicted RBP12.16□□□□□ -0.46
SRP54-203ENST00000553544 C1orf131Q8NDD1 294 aaKnown RBP12.16□□□□□ -0.46
SRP54-203ENST00000553544 MYEOVQ96EZ4 313 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 SLC2A13Q96QE2 648 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 PLCB1Q9NQ66 1216 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 FANCLQ9NW38 375 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 TAB2Q9NYJ8 693 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 ARHGAP20Q9P2F6 1191 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 SLCO3A1Q9UIG8 710 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 INTS6Q9UL03 887 aaKnown RBP12.16□□□□□ -0.46
SRP54-203ENST00000553544 DMTF1Q9Y222 760 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 CEP83Q9Y592 693 aa12.16□□□□□ -0.46
SRP54-203ENST00000553544 ARID1BQ8NFD5 2236 aaPredicted RBP12.16□□□□□ -0.46
SRP54-203ENST00000553544 LRRC10BA6NIK2 292 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 TRIM38O00635 465 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 KLK10O43240 276 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 USP12O75317 370 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 DXOO77932 396 aaKnown RBP12.15□□□□□ -0.46
SRP54-203ENST00000553544 TRUB2O95900 331 aaKnown RBP12.15□□□□□ -0.46
SRP54-203ENST00000553544 MPOP05164 745 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 CYP11B1P15538 503 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 KRT9P35527 623 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 VAC14Q08AM6 782 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 CDH18Q13634 790 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 LY6DQ14210 128 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 KRT31Q15323 416 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 PTPN20Q4JDL3 420 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 EFHC1Q5JVL4 640 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 OLFML1Q6UWY5 402 aa12.15□□□□□ -0.46
SRP54-203ENST00000553544 C11orf57Q6ZUT1 292 aaPredicted RBP12.15□□□□□ -0.46
SRP54-203ENST00000553544 FAM183BPQ6ZVS7 135 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms